RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TMEM259Q4ZIN3 620 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ALFQ53S48 1182 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ACBD5Q5T8D3 534 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 OTUD1Q5VV17 481 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 OR6B2Q6IFH4 312 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 GJB7Q6PEY0 223 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 GCNT7Q6ZNI0 430 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ZDHHC17Q8IUH5 632 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF683Q8IZ20 524 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 SLC22A18ASQ8N1D0 253 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF843Q8N446 348 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 NT5C3BQ969T7 300 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 PGAP3Q96FM1 320 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 C1orf74Q96LT6 269 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 DEPDC7Q96QD5 511 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 LGMNQ99538 433 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 DUSP23Q9BVJ7 150 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 CALN1Q9BXU9 219 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 TKTL2Q9H0I9 626 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 FZD3Q9NPG1 666 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ANLNQ9NQW6 1124 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 GPR27Q9NS67 375 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 PIGVQ9NUD9 493 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 EVA1BQ9NVM1 165 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 ZFR2Q9UPR6 939 aaKnown RBP12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
CARMIL3-204ENST00000561354 A0A0D9SEW6 157 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 GTPBP10A4D1E9 387 aaKnown RBP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 A6NNZ2 444 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 I6L893 689 aaPredicted RBP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 K7ESM1 405 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 RNF103O00237 685 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 SMAD6O43541 496 aaKnown RBP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 PCDH8O95206 1070 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 ZIC2O95409 532 aaPredicted RBP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 ADCY5O95622 1261 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 F9P00740 461 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 MPOP05164 745 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 PLA2G2AP14555 144 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 RRM1P23921 792 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 RECQLP46063 649 aaPredicted RBP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 UCNP55089 124 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 CLDN2P57739 230 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 HNRNPKP61978 463 aaKnown RBP eCLIP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 RPS21P63220 83 aaKnown RBP12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 SEL1L3Q68CR1 1132 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 KIAA1161Q6NSJ0 714 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 C22orf39Q6P5X5 142 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 LRRC31Q6UY01 552 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 GBP6Q6ZN66 633 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 Q6ZSR6 202 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 TMC6Q7Z403 805 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF605Q86T29 641 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 ZSCAN30Q86W11 494 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 PASD1Q8IV76 773 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 CHST14Q8NCH0 376 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 WBP1Q96G27 269 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 PPP1R16AQ96I34 528 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 BMFQ96LC9 184 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 POLR1BQ9H9Y6 1135 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 STAP1Q9ULZ2 295 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 CSNK1G3Q9Y6M4 447 aa12.09□□□□□ -0.47
CARMIL3-204ENST00000561354 GCN1Q92616 2671 aaKnown RBP12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 IGLV3-10A0A075B6K4 115 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 LY6G6EA0A0G2JKS1 128 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 SPTY2D1-AS1A0A0U1RR47 76 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 BIN1O00499 593 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 USP12O75317 370 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 CSO75390 466 aaKnown RBP12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 ZNF821O75541 412 aaPredicted RBP12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 KRT9P35527 623 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 NEK3P51956 506 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 TMPRSS3P57727 454 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 GABREP78334 506 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 RHDQ02161 417 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 CFHR1Q03591 330 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 SLC20A2Q08357 652 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 FZD2Q14332 565 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 EXOC3L4Q17RC7 722 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 PTPN20Q4JDL3 420 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 BROXQ5VW32 411 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 RETSATQ6NUM9 610 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 IGF2-ASQ6U949 168 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 LINGO4Q6UY18 593 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 KYAT3Q6YP21 454 aaKnown RBP12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 ZNF783Q6ZMS7 281 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 DPY19L3Q6ZPD9 716 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 GRIN3AQ8TCU5 1115 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 GRAMD1AQ96CP6 724 aa12.08□□□□□ -0.48
CARMIL3-204ENST00000561354 FEM1CQ96JP0 617 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms