RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ADPRHL1Q8NDY3 354 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SRFBP1Q8NEF9 429 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 TMIEQ8NEW7 156 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 IPMKQ8NFU5 416 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 OR52K2Q8NGK3 314 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 MAFAQ8NHW3 353 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 SLC2A12Q8TD20 617 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 OSCP1Q8WVF1 389 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 UBLCP1Q8WVY7 318 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 SGCDQ92629 289 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TFAP2CQ92754 450 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 MR1Q95460 341 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TUBGCP3Q96CW5 907 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 MISP3Q96FF7 219 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TSPAN17Q96FV3 270 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PERPQ96FX8 193 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SCARF2Q96GP6 870 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 RPL10LQ96L21 214 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 HARBI1Q96MB7 349 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NLRP4Q96MN2 994 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ZSWIM3Q96MP5 696 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 WDFY2Q96P53 400 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NEK1Q96PY6 1258 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NUDCD1Q96RS6 583 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PLIN2Q99541 437 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TXN2Q99757 166 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.11□□□□□ -2.07
RTF1-207ENST00000561076 MLPHQ9BV36 600 aaPredicted RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 CARD6Q9BX69 1037 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HAPLN2Q9GZV7 340 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NT5C3AQ9H0P0 336 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 CHMP4BQ9H444 224 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 PLK3Q9H4B4 646 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 BCAS3Q9H6U6 928 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 C7orf69Q9H7B7 122 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 POLR1BQ9H9Y6 1135 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 GCM1Q9NP62 436 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NRIP3Q9NQ35 241 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PIH1D3Q9NQM4 214 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 ENTPD7Q9NQZ7 604 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 FBXO34Q9NWN3 711 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TMEM161AQ9NX61 479 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ZDHHC7Q9NXF8 308 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HSPBP1Q9NZL4 362 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 HEY2Q9UBP5 337 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NXF1Q9UBU9 619 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 FBXL17Q9UF56 701 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 FETUBQ9UGM5 382 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 PCSK1NQ9UHG2 260 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 SLC24A2Q9UI40 661 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ANAPC2Q9UJX6 822 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 APPL1Q9UKG1 709 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ITGA11Q9UKX5 1188 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 AGAP1Q9UPQ3 857 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 R3HDM2Q9Y2K5 976 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 SLC27A6Q9Y2P4 619 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 MRPS17Q9Y2R5 130 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 KCNK7Q9Y2U2 307 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 TDRKHQ9Y2W6 561 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 AAR2Q9Y312 384 aaKnown RBP2.11□□□□□ -2.07
RTF1-207ENST00000561076 FAM96BQ9Y3D0 163 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 NEU2Q9Y3R4 380 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ACEP12821 1306 aa2.11□□□□□ -2.07
RTF1-207ENST00000561076 ZMYM3Q14202 1370 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CCDC195A0A1B0GUA6 201 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 OR2A25A4D2G3 310 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ARHGAP42A6NI28 874 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PRSS29PA6NIE9 313 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CDRT15L2A8MXV6 281 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TTC34A8MYJ7 566 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 FAM25EA8MYX2 175 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 AKR1B15C9JRZ8 316 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 F5H697 171 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 H0YIN7 160 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 H3BQ06 376 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 K7EPI3 171 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 AP3B1O00203 1094 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CACNB4O00305 520 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 O00370 1275 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 IFIT3O14879 490 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 SMAD9O15198 467 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 GSC2O15499 205 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 NKX2-8O15522 239 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TGFB1I1O43294 461 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CTIFO43310 598 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 TRIAP1O43715 76 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SLC25A17O43808 307 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SSX5O60225 188 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KLHL41O60662 606 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MITFO75030 526 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 ZC3H11AO75152 810 aaKnown RBP eCLIP2.1□□□□□ -2.07
RTF1-207ENST00000561076 IDH1O75874 414 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 GCNT3O95395 438 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CBX6O95503 412 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 BCL10O95999 233 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MT-ATP6P00846 226 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 IL1AP01583 271 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ALPPP05187 535 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MMP2P08253 660 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms