RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IL17BQ9UHF5 180 aa18.98■□□□□ 0.63
TPM1-226ENST00000560959 PIEZO2Q9H5I5 2752 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 E5RJQ4 531 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 MED7O43513 233 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 BNIP3LO60238 219 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 CALCAP01258 141 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 PITX1P78337 314 aaPredicted RBP18.97■□□□□ 0.63
TPM1-226ENST00000560959 KRT85P78386 507 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 CLN3Q13286 438 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 CDKN3Q16667 212 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 GUSBP11Q6P575 273 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 EFL1Q7Z2Z2 1120 aaKnown RBP18.97■□□□□ 0.63
TPM1-226ENST00000560959 ATP11CQ8NB49 1132 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 FEM1CQ96JP0 617 aa18.97■□□□□ 0.63
TPM1-226ENST00000560959 LENG8Q96PV6 779 aaPredicted RBP18.97■□□□□ 0.63
TPM1-226ENST00000560959 CPED1A4D0V7 1026 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 AQP9O43315 295 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 MT-CO1P00395 513 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 HSP90AA1P07900 732 aaKnown RBP18.96■□□□□ 0.63
TPM1-226ENST00000560959 ITGA2BP08514 1039 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 RPIAP49247 311 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
TPM1-226ENST00000560959 CENPCQ03188 943 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 NR0B2Q15466 257 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 ZNF542PQ5EBM4 170 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 SEL1L3Q68CR1 1132 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 DENND1BQ6P3S1 775 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 PTAR1Q7Z6K3 402 aaPredicted RBP18.96■□□□□ 0.63
TPM1-226ENST00000560959 BTN2A2Q8WVV5 523 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 GLMNQ92990 594 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 GSDMAQ96QA5 445 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 SLC2A13Q96QE2 648 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 BOCQ9BWV1 1114 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 FAM117AQ9C073 453 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 MUC3BQ9H195 1237 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 FAM204AQ9H8W3 233 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 DDIT4Q9NX09 232 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 IL36AQ9UHA7 158 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 ATXN7L1Q9ULK2 861 aaPredicted RBP18.96■□□□□ 0.63
TPM1-226ENST00000560959 VANGL2Q9ULK5 521 aa18.96■□□□□ 0.63
TPM1-226ENST00000560959 HEMK1Q9Y5R4 338 aaPredicted RBP18.96■□□□□ 0.63
TPM1-226ENST00000560959 POM121BA6NF01 834 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 PYCARD-AS1I3L0S3 204 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 AP1G1O43747 822 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 PAK4O96013 591 aaPredicted RBP18.95■□□□□ 0.62
TPM1-226ENST00000560959 ARSIQ5FYB1 569 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 EFHC1Q5JVL4 640 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 RRAGAQ7L523 313 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 SETD3Q86TU7 594 aaPredicted RBP18.95■□□□□ 0.62
TPM1-226ENST00000560959 EXD3Q8N9H8 876 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 EHBP1Q8NDI1 1231 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 ZNF606Q8WXB4 792 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 ASB12Q8WXK4 309 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 NAT6Q93015 286 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 TBATAQ96M53 351 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 CEP63Q96MT8 703 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 PSMB7Q99436 277 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 IL12RB2Q99665 862 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.95■□□□□ 0.62
TPM1-226ENST00000560959 CAAP1Q9H8G2 361 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.95■□□□□ 0.62
TPM1-226ENST00000560959 HS3ST4Q9Y661 456 aa18.95■□□□□ 0.62
TPM1-226ENST00000560959 CCDC187A0A096LP49 1063 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 EFSO43281 561 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 TNFSF15O95150 251 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 JUNDP17535 347 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 NEK3P51956 506 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 INHBCP55103 352 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 FGL2Q14314 439 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 TAF5Q15542 800 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 OR6B2Q6IFH4 312 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 PRICKLE2Q7Z3G6 844 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 DEFB106AQ8N104 65 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 IPO11Q9UI26 975 aaKnown RBP18.94■□□□□ 0.62
TPM1-226ENST00000560959 VPS51Q9UID3 782 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 KLF15Q9UIH9 416 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 ACSL6Q9UKU0 697 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 PCDHGA7Q9Y5G6 932 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 FADS3Q9Y5Q0 445 aa18.94■□□□□ 0.62
TPM1-226ENST00000560959 TDRD6O60522 2096 aaKnown RBP18.93■□□□□ 0.62
TPM1-226ENST00000560959 K7ERQ8 282 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 FPGTO14772 594 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 HSF2BPO75031 334 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 ITGB2P05107 769 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 SFTPCP11686 197 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 ADRB3P13945 408 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 RECQLP46063 649 aaPredicted RBP18.93■□□□□ 0.62
TPM1-226ENST00000560959 IRAK1P51617 712 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 SRSF1Q07955 248 aaKnown RBP eCLIP18.93■□□□□ 0.622e-10■■■□□ 14.7
TPM1-226ENST00000560959 SLC20A2Q08357 652 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 EIF3IQ13347 325 aaKnown RBP18.93■□□□□ 0.62
TPM1-226ENST00000560959 PDCLQ13371 301 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 ZSCAN23Q3MJ62 389 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 ACBD5Q5T8D3 534 aaPredicted RBP18.93■□□□□ 0.62
TPM1-226ENST00000560959 ARHGEF19Q8IW93 802 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 DCAF4L2Q8NA75 395 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 CHST14Q8NCH0 376 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 LIN37Q96GY3 246 aaPredicted RBP18.93■□□□□ 0.62
TPM1-226ENST00000560959 KREMEN1Q96MU8 473 aa18.93■□□□□ 0.62
TPM1-226ENST00000560959 C1QTNF2Q9BXJ5 285 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms