RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 METTL12A8MUP2 240 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 PATE3B3GLJ2 98 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 ADH1BP00325 375 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 IL1BP01584 269 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 AMPD1P23109 780 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 MAGEA1P43355 309 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 TTC31Q49AM3 519 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 TCEAL6Q6IPX3 200 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 LEKR1Q6ZMV7 388 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 DPY19L3Q6ZPD9 716 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 PRR23CQ6ZRP0 262 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 SYT12Q8IV01 421 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 TMEM139Q8IV31 216 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 TP53INP2Q8IXH6 220 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 RHOT2Q8IXI1 618 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 PLPP6Q8IY26 295 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 PCDH20Q8N6Y1 951 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 NETO2Q8NC67 525 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 PIP4K2CQ8TBX8 421 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 TCEAL3Q969E4 200 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 CELF6Q96J87 481 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 CSPG4P5Q96PW8 444 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 BTBD1Q9H0C5 482 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 PCED1AQ9H1Q7 454 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 C6orf106Q9H6K1 298 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 PDFQ9HBH1 243 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 SGK2Q9HBY8 427 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 VPS45Q9NRW7 570 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 RXFP3Q9NSD7 469 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 DONSONQ9NYP3 566 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 EPN1Q9Y6I3 576 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 LAMA1P25391 3075 aa15.57■□□□□ 0.08
SNRPA1-213ENST00000560856 CACNA1EQ15878 2313 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 ZSCAN5CA6NGD5 496 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 SOWAHDA6NJG2 315 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 H3BRJ5 948 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 PLK4O00444 970 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 SEMA4FO95754 770 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 CD48P09326 243 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 CHRNA3P32297 505 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 MESDQ14696 234 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 RAD9BQ6WBX8 426 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 TMTC1Q8IUR5 882 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 HDDC3Q8N4P3 179 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 TMIEQ8NEW7 156 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 C1orf216Q8TAB5 229 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 FOXJ1Q92949 421 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 ORAI3Q9BRQ5 295 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 LCMT1Q9UIC8 334 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 FZD4Q9ULV1 537 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 HPCAL4Q9UM19 191 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 TFR2Q9UP52 801 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 REXO2Q9Y3B8 237 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 PCDHA13Q9Y5I0 950 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 WASF2Q9Y6W5 498 aa15.56■□□□□ 0.08
SNRPA1-213ENST00000560856 ATXN2Q99700 1313 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 RCCD1A6NED2 376 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 J3KR12 359 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 DAPK3O43293 454 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 BUB1O43683 1085 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 BNIP3LO60238 219 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 GDF9O60383 454 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 PRAMEF11O60813 436 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 TMCC1O94876 653 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 MAOBP27338 520 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 HOXD12P35452 270 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 ARHGAP25P42331 645 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 HADHBP55084 474 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 CDH6P55285 790 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 GEMIN4P57678 1058 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 CNTN1Q12860 1018 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 MMRN1Q13201 1228 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 CYTH1Q15438 398 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 HADHQ16836 314 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 INO80DQ53TQ3 878 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 CARD16Q5EG05 197 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 DCAF12L1Q5VU92 463 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 FAM46CQ5VWP2 391 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 DSG4Q86SJ6 1040 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 ARRDC3Q96B67 414 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 RCOR3Q9P2K3 495 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 IMPACTQ9P2X3 320 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 EVLQ9UI08 416 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 NCKAP1Q9Y2A7 1128 aa15.55■□□□□ 0.08
SNRPA1-213ENST00000560856 TMEM110-MUSTN1A8MSY1 372 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 RNASEH2AO75792 299 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 NDUFA10O95299 355 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 GSRP00390 522 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 IGHV4-34P06331 123 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 CYLC1P35663 651 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 ARL4AP40617 200 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 CCNHP51946 323 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 ADPRHP54922 357 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 IRX4P78413 519 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 SFSWAPQ12872 951 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 DPYSL3Q14195 570 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 POM121L1PQ3SYA9 428 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 ARSIQ5FYB1 569 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 AGBL4Q5VU57 503 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms