RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 RPS21P63220 83 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 DPYDQ12882 1025 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 FZD2Q14332 565 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 SEL1L3Q68CR1 1132 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 FBXL22Q6P050 247 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 JAMLQ86YT9 394 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 LURAP1LQ8IV03 231 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 BTN2A2Q8WVV5 523 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 SGF29Q96ES7 293 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 ALG14Q96F25 216 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 FEM1CQ96JP0 617 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 BMFQ96LC9 184 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 PRMT1Q99873 361 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 ZSWIM1Q9BR11 485 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 SLC17A9Q9BYT1 436 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 COX16Q9P0S2 106 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 SPASTQ9UBP0 616 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 ARMCX3Q9UH62 379 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 HPSEQ9Y251 543 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 ATP6V1DQ9Y5K8 247 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 POM121BA6NF01 834 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 TERTO14746 1132 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 FPGTO14772 594 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 PAK4O96013 591 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 ITGB2P05107 769 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 SRCP12931 536 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 YWHAZP63104 245 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 KRT85P78386 507 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 CDK17Q00537 523 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 CENPCQ03188 943 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 CETN1Q12798 172 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 SGCGQ13326 291 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 MTA1Q13330 715 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 PDE1CQ14123 709 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 KIAA1161Q6NSJ0 714 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 OR2A12Q8NGT7 310 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 GRIN3AQ8TCU5 1115 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 SPATA32Q96LK8 384 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 C2orf49Q9BVC5 232 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 HDAC8Q9BY41 377 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 STARD5Q9NSY2 213 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 DDIT4Q9NX09 232 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 SEPT3Q9UH03 358 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 IL36AQ9UHA7 158 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 VANGL2Q9ULK5 521 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 HS3ST2Q9Y278 367 aa18.23■□□□□ 0.51
TSPAN3-208ENST00000560514 COL27A1Q8IZC6 1860 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 PMS2P1A4D2B8 440 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 CLDN11O75508 207 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 CALCAP01258 141 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 IGLV3-25P01717 112 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 GPD2P43304 727 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 NEK3P51956 506 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 NFKB2Q00653 900 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 FKBP3Q00688 224 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 AUHQ13825 339 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 LINC00303Q3SY05 128 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 TMEM259Q4ZIN3 620 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 ARSIQ5FYB1 569 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 C14orf80Q86SX3 495 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 FBXO39Q8N4B4 442 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 EXTL1Q92935 676 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 CCDC34Q96HJ3 373 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 SCAND2PQ9GZW5 306 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 THAP9Q9H5L6 903 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 DOPEY2Q9Y3R5 2298 aa18.22■□□□□ 0.51
TSPAN3-208ENST00000560514 AHCTF1Q8WYP5 2266 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 TMX2-CTNND1H3BSU7 103 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 PLD2O14939 933 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 ANXA6P08133 673 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 SLC5A2P31639 672 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 RPL34P49207 117 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 EIF3IQ13347 325 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 DRAP1Q14919 205 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 PERM1Q5SV97 790 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 ESRP1Q6NXG1 681 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 SMYD4Q8IYR2 804 aaPredicted RBP18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 ZSCAN1Q8NBB4 408 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 OR52K2Q8NGK3 314 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 CCDC3Q9BQI4 270 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 STRADBQ9C0K7 418 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 EPB41L5Q9HCM4 733 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 GPR27Q9NS67 375 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 SEPT10Q9P0V9 454 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 ZDHHC9Q9Y397 364 aa18.21■□□□□ 0.51
TSPAN3-208ENST00000560514 A0A1W2PQ27 194 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 A0A1W2PQ64 194 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 E5RJQ4 531 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 SUV39H1O43463 412 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 MED7O43513 233 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 MT-CO1P00395 513 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 RHOCP08134 193 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 RRM1P23921 792 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 CLCN6P51797 869 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 NDUFA8P51970 172 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 THOP1P52888 689 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 CDH4P55283 916 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 PTK2BQ14289 1009 aa18.2■□□□□ 0.5
TSPAN3-208ENST00000560514 ZSCAN30Q86W11 494 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms