RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TCRBV7S3A2A0A539 114 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 CBX4O00257 560 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 ALOX15BO15296 676 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 TBX10O75333 385 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 TMEM63AO94886 807 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 ADH1CP00326 375 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 HLA-DQB2P05538 268 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 TYRP14679 529 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 LTBRP36941 435 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 HSD17B3P37058 310 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 MAGEA3P43357 314 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 MAGEA4P43358 317 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 EIF3BP55884 814 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 GAD2Q05329 585 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 SULT2A1Q06520 285 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 NSUN2Q08J23 767 aaKnown RBP eCLIP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 SLC10A7Q0GE19 358 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 PDIA2Q13087 525 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 PDGFRLQ15198 375 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 SLC14A2Q15849 920 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 EML3Q32P44 896 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 FSCBQ5H9T9 825 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 RALGPS1Q5JS13 557 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 FAXCQ5TGI0 409 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 ARMC3Q5W041 872 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 KCTD11Q693B1 232 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 NAPEPLDQ6IQ20 393 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 RETSATQ6NUM9 610 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 LRIG3Q6UXM1 1119 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 CROCCP2Q86T23 111 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 TMEM25Q86YD3 366 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 CCNJLQ8IV13 435 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 MFSD6LQ8IWD5 586 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 IQCKQ8N0W5 287 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 CNTD1Q8N815 330 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 PDCD7Q8N8D1 485 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 DCAF4L2Q8NA75 395 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 OR52K2Q8NGK3 314 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 RIN3Q8TB24 985 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 USP33Q8TEY7 942 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 ATP2A3Q93084 1043 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 ALG14Q96F25 216 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 IMP4Q96G21 291 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 SERPINB12Q96P63 405 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 PSKH2Q96QS6 385 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 XPO6Q96QU8 1125 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 NAT9Q9BTE0 207 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 SPON2Q9BUD6 331 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 BBS2Q9BXC9 721 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 CEP41Q9BYV8 373 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 POLR1EQ9GZS1 481 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 LINC00597Q9H2U6 94 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 CDC42EP4Q9H3Q1 356 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 ZFP14Q9HCL3 533 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 SAYSD1Q9NPB0 183 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 NT5MQ9NPB1 228 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 DUS2Q9NX74 493 aaKnown RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 UBA2Q9UBT2 640 aaPredicted RBP8.76□□□□□ -1.01
TRAF3-209ENST00000560463 SEPT3Q9UH03 358 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 VPS28Q9UK41 221 aa8.76□□□□□ -1.01
TRAF3-209ENST00000560463 HEPACAM2A8MVW5 462 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 NEDD8-MDP1E9PL57 170 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 GOLGA8MH3BSY2 632 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 SCAMP3O14828 347 aaKnown RBP8.75□□□□□ -1.01
TRAF3-209ENST00000560463 HOXC11O43248 304 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-209ENST00000560463 RIPK2O43353 540 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 SPAG6O75602 509 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 ZMPSTE24O75844 475 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 TTC4O95801 387 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 ABHD2P08910 425 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 GSTA2P09210 222 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 NUDT17P0C025 328 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 LAMP2P13473 410 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 IGFBP4P22692 258 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 FCARP24071 287 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 MZF1P28698 734 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-209ENST00000560463 PHBP35232 272 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 CSKP41240 450 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 NPY2RP49146 381 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 DLX2Q07687 328 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-209ENST00000560463 ITKQ08881 620 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 FCHO2Q0JRZ9 810 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 CDH17Q12864 832 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 LMAN2Q12907 356 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 NR1H3Q13133 447 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 UAP1Q16222 522 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-209ENST00000560463 KYNUQ16719 465 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 PLEKHG6Q3KR16 790 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 CCDC38Q502W7 563 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 DNAJC21Q5F1R6 531 aaKnown RBP8.75□□□□□ -1.01
TRAF3-209ENST00000560463 LY6G5CQ5SRR4 150 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 FNBP1LQ5T0N5 605 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 DENND2CQ68D51 928 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 GPR153Q6NV75 609 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 MTSS1LQ765P7 747 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 OTOP3Q7RTS5 596 aa8.75□□□□□ -1.01
TRAF3-209ENST00000560463 KIAA0907Q7Z7F0 614 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms