RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 B3GNT8Q7Z7M8 397 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 PTRH1Q86Y79 214 aaKnown RBP11.04□□□□□ -0.64
TRAF3-207ENST00000559734 SLC35F3Q8IY50 421 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 ZSCAN1Q8NBB4 408 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 CHST14Q8NCH0 376 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 OR52K2Q8NGK3 314 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 WDR48Q8TAF3 677 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 NAT6Q93015 286 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 HSFY1Q96LI6 401 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 ZSWIM1Q9BR11 485 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 FEM1AQ9BSK4 669 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 SLC17A9Q9BYT1 436 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 FOXP3Q9BZS1 431 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 STRADBQ9C0K7 418 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 TCEAL2Q9H3H9 227 aaPredicted RBP11.04□□□□□ -0.64
TRAF3-207ENST00000559734 SPASTQ9UBP0 616 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 GULP1Q9UBP9 304 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 APOBEC3BQ9UH17 382 aaKnown RBP11.04□□□□□ -0.64
TRAF3-207ENST00000559734 SALL4Q9UJQ4 1053 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 CSNK1G3Q9Y6M4 447 aa11.04□□□□□ -0.64
TRAF3-207ENST00000559734 COL27A1Q8IZC6 1860 aaPredicted RBP11.04□□□□□ -0.64
TRAF3-207ENST00000559734 SPTY2D1-AS1A0A0U1RR47 76 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 KCNU1A8MYU2 1149 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 K7ERQ8 282 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 FPGTO14772 594 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 SART1O43290 800 aaKnown RBP11.03□□□□□ -0.64
TRAF3-207ENST00000559734 SNAP91O60641 907 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 ENDOD1O94919 500 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 MT-CO1P00395 513 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PRNPP04156 253 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 ANXA6P08133 673 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PAEPP09466 180 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 JMJD7P0C870 316 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 GP1BBP13224 206 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 RRM1P23921 792 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 TBXAS1P24557 533 aaPredicted RBP11.03□□□□□ -0.64
TRAF3-207ENST00000559734 UGT1A5P35504 534 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 ADKP55263 362 aaKnown RBP11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PITX1P78337 314 aaPredicted RBP11.03□□□□□ -0.64
TRAF3-207ENST00000559734 FGL2Q14314 439 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 TCEA2Q15560 299 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 CNGA2Q16280 664 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 TMEM259Q4ZIN3 620 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PRRT3Q5FWE3 981 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 TPRG1LQ5T0D9 272 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 FBXL22Q6P050 247 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 OR2A12Q8NGT7 310 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 ALG14Q96F25 216 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 LIN37Q96GY3 246 aaPredicted RBP11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PPP1R16AQ96I34 528 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 TNKS2Q9H2K2 1166 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 GPR27Q9NS67 375 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 SEPT10Q9P0V9 454 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 SIRPGQ9P1W8 387 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 IL36AQ9UHA7 158 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 VANGL2Q9ULK5 521 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 DOLKQ9UPQ8 538 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PCDHGA4Q9Y5G9 962 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 HS3ST3A1Q9Y663 406 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PTPN13Q12923 2485 aa11.03□□□□□ -0.64
TRAF3-207ENST00000559734 PIEZO2Q9H5I5 2752 aa11.02□□□□□ -0.64
TRAF3-207ENST00000559734 A0A1B0GVL5 298 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 RNF225M0QZC1 329 aaPredicted RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 TPP1O14773 563 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 CETN3O15182 167 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 SPINT1O43278 529 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 NOBOXO60393 691 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 LIPCP11150 499 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 PFKFB1P16118 471 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 RECQLP46063 649 aaPredicted RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 NEK3P51956 506 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 RPS21P63220 83 aaKnown RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 KRT83P78385 493 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 EIF2B5Q13144 721 aaKnown RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 EIF3IQ13347 325 aaKnown RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 STILQ15468 1287 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 SKIDA1Q1XH10 827 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 KIAA1161Q6NSJ0 714 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 ESRP1Q6NXG1 681 aaKnown RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 LINGO4Q6UY18 593 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 PHACTR4Q8IZ21 702 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 SDR16C5Q8N3Y7 309 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 GUF1Q8N442 669 aaKnown RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 UBR7Q8N806 425 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 TMIEQ8NEW7 156 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 BTN2A2Q8WVV5 523 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 KAT5Q92993 513 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 SNX21Q969T3 373 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 CCDC74AQ96AQ1 378 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 GFM1Q96RP9 751 aaKnown RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 TRIM62Q9BVG3 475 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 BOCQ9BWV1 1114 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 SLC25A18Q9H1K4 315 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAF3-207ENST00000559734 DDIT4Q9NX09 232 aa11.02□□□□□ -0.65
TRAF3-207ENST00000559734 PADI4Q9UM07 663 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms