RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 SRP72O76094 671 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 LRIG2O94898 1065 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 ATP6V1B1P15313 513 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 PECAM1P16284 738 aaPredicted RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 PSMB4P28070 264 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CD86P42081 329 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CASP2P42575 452 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 WASP42768 502 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 DPYSL3Q14195 570 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 C16orf87Q6PH81 154 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 RD3Q7Z3Z2 195 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 ADCK2Q7Z695 626 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 PYROXD2Q8N2H3 581 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 OR6K2Q8NGY2 324 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 SGF29Q96ES7 293 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 HES6Q96HZ4 224 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CSPG4P5Q96PW8 444 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 PPP1R10Q96QC0 940 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CRTAC1Q9NQ79 661 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 MAN1C1Q9NR34 630 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CHCHD3Q9NX63 227 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 NSMCE4AQ9NXX6 385 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 ZNF510Q9Y2H8 683 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 MYH8P13535 1937 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 A0A0A0MRY4 1105 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 TRIM49D1C9J1S8 452 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 RASSF9O75901 435 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 TRIM16O95361 564 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CA3P07451 260 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 PTPN9P43378 593 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 WNT7BP56706 349 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 DEFB103AP81534 67 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 MPPE1Q53F39 396 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 SH3PXD2AQ5TCZ1 1133 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 RNF19BQ6ZMZ0 732 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 PRUNE1Q86TP1 453 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 TMEM130Q8N3G9 435 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 BORCS6Q96GS4 357 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 SPATA13Q96N96 652 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 TMEM209Q96SK2 561 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 OMDQ99983 421 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CLPBQ9H078 707 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 SALL4Q9UJQ4 1053 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 CORO1CQ9ULV4 474 aaPredicted RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 NCKAP1Q9Y2A7 1128 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 COL4A5P29400 1685 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 KCNU1A8MYU2 1149 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 KRT16P08779 473 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 NFKB1P19838 968 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 MGAT1P26572 445 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 ELK3P41970 407 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 WASHC2DQ5SRD0 308 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 GRASPQ7Z6J2 395 aaPredicted RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 RAB42Q8N4Z0 105 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 PRELID2Q8N945 189 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 MYLK2Q9H1R3 596 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 KIAA1522Q9P206 1035 aaPredicted RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 TRIM33Q9UPN9 1127 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 DRG1Q9Y295 367 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 DNALI1O14645 258 aaPredicted RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 VAPBO95292 243 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 NFATC1O95644 943 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 GLP2RO95838 553 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 AFF1P51825 1210 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 GBE1Q04446 702 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 PARP6Q2NL67 630 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 PLEKHG4Q58EX7 1191 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 UBXN11Q5T124 520 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 IZUMO2Q6UXV1 221 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 CCDC185Q8N715 623 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 SMOQ99835 787 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 HAUS8Q9BT25 410 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 PRDM16Q9HAZ2 1276 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 DUS2Q9NX74 493 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 PIRTP0C851 137 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 AUHQ13825 339 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 ACOX1Q15067 660 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 AARS2Q5JTZ9 985 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 TMEM110Q86TL2 294 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 ARID3BQ8IVW6 561 aaPredicted RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 CMTR2Q8IYT2 770 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 MAGEC3Q8TD91 643 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 SH3RF2Q8TEC5 729 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 OSGEPL1Q9H4B0 414 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 CCSER2Q9H7U1 834 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 HBS1LQ9Y450 684 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 E9PAM4 449 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 AHCYL1O43865 530 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 NBNO60934 754 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 PBLDP30039 288 aaPredicted RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 PPP3CCP48454 512 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 AIF1P55008 147 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 TRIP4Q15650 581 aaPredicted RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 IMPG1Q17R60 797 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 LRRC26Q2I0M4 334 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 CCDC157Q569K6 752 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 HFE2Q6ZVN8 426 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms