RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TBX4P57082 545 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 C16orf72Q14CZ0 275 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 DLG2Q15700 870 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 LACTB2Q53H82 288 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-206ENST00000558739 FAM26FQ5R3K3 315 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 C1QL3Q5VWW1 255 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 PHACTR4Q8IZ21 702 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 LGI2Q8N0V4 545 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 Q8N9G6 341 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-206ENST00000558739 GRIN3AQ8TCU5 1115 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 TAS1R2Q8TE23 839 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 CLEC4CQ8WTT0 213 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
SMAD3-206ENST00000558739 KLF6Q99612 283 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-206ENST00000558739 NIF3L1Q9GZT8 377 aa12.17□□□□□ -0.46
SMAD3-206ENST00000558739 ARHGEF17Q96PE2 2063 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-206ENST00000558739 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 WIPF3A6NGB9 483 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 H3BQV1 296 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 SPTLC2O15270 562 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 ATP9BO43861 1147 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 RPN1P04843 607 aaKnown RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 ZNF18P17022 549 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 RABIFP47224 123 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 IRAK1P51617 712 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 AP3M2P53677 418 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 RAD23BP54727 409 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 ZFP36L1Q07352 338 aaKnown RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 RAP1GAP2Q684P5 730 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 CXorf57Q6NSI4 855 aaKnown RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 NEK5Q6P3R8 708 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 MAMDC2Q7Z304 686 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 SLITRK4Q8IW52 837 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 C12orf56Q8IXR9 622 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 ARL10Q8N8L6 244 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 ANKRD52Q8NB46 1076 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 CHST14Q8NCH0 376 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 TAF4BQ92750 862 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 LRRN3Q9H3W5 708 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 TFIP11Q9UBB9 837 aaKnown RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 SPASTQ9UBP0 616 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 IPO11Q9UI26 975 aaKnown RBP12.16□□□□□ -0.46
SMAD3-206ENST00000558739 RNF215Q9Y6U7 377 aa12.16□□□□□ -0.46
SMAD3-206ENST00000558739 STMND1H3BQB6 276 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 K7ERQ8 282 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 BMP15O95972 392 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 MT-CO1P00395 513 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 ANXA6P08133 673 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 TRIM49P0CI25 452 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 TRIM49CP0CI26 452 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 LCP1P13796 627 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 TRIM21P19474 475 aaKnown RBP12.15□□□□□ -0.46
SMAD3-206ENST00000558739 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
SMAD3-206ENST00000558739 NOS2P35228 1153 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 NNMTP40261 264 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 DAOAP59103 153 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 KLRB1Q12918 225 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 ARHGAP44Q17R89 818 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 PHF19Q5T6S3 580 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 CCDC73Q6ZRK6 1079 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 DCP2Q8IU60 420 aaKnown RBP12.15□□□□□ -0.46
SMAD3-206ENST00000558739 UNC45BQ8IWX7 931 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 UBA3Q8TBC4 463 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 GLMNQ92990 594 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 TMEM74Q96NL1 305 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 SLC17A9Q9BYT1 436 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 SEMA6CQ9H3T2 930 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 CYP3A43Q9HB55 503 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 LRRC4Q9HBW1 653 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 GGT7Q9UJ14 662 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 TSPAN16Q9UKR8 245 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 NAALADL1Q9UQQ1 740 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 HS3ST3A1Q9Y663 406 aa12.15□□□□□ -0.46
SMAD3-206ENST00000558739 SVILO95425 2214 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 XPO1O14980 1071 aaKnown RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 ALOX15BO15296 676 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 PRF1P14222 555 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 ITGB7P26010 798 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 UGT1A3P35503 534 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 GCLMP48507 274 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 RGS7P49802 495 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 PFN3P60673 137 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 CENPCQ03188 943 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 KCTD16Q68DU8 428 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 ESRP1Q6NXG1 681 aaKnown RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 ERN2Q76MJ5 926 aaKnown RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 CHSY1Q86X52 802 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 CCDC117Q8IWD4 279 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 CCAR2Q8N163 923 aaKnown RBP12.14□□□□□ -0.47
SMAD3-206ENST00000558739 SIX6OS1Q8N1H7 587 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 IL22RA1Q8N6P7 574 aa12.14□□□□□ -0.47
SMAD3-206ENST00000558739 RCBTB1Q8NDN9 531 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms