RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CNDP1Q96KN2 507 aa15.7■□□□□ 0.1
AP4E1-202ENST00000558439 VAT1Q99536 393 aa15.7■□□□□ 0.1
AP4E1-202ENST00000558439 ALG9Q9H6U8 611 aa15.7■□□□□ 0.1
AP4E1-202ENST00000558439 NDFIP2Q9NV92 336 aa15.7■□□□□ 0.1
AP4E1-202ENST00000558439 AFF4Q9UHB7 1163 aaKnown RBP15.7■□□□□ 0.1
AP4E1-202ENST00000558439 FBXO5Q9UKT4 447 aa15.7■□□□□ 0.1
AP4E1-202ENST00000558439 MAGEC1O60732 1142 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 ZNF189O75820 626 aaPredicted RBP15.69■□□□□ 0.1
AP4E1-202ENST00000558439 AMHP03971 560 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 OR4Q2P0C623 313 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 IRF1P10914 325 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 CHRM3P20309 590 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 PRKCHP24723 683 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 FASTKQ14296 549 aaKnown RBP15.69■□□□□ 0.1
AP4E1-202ENST00000558439 SLC39A12Q504Y0 691 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 ARHGAP17Q68EM7 881 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 CXorf38Q8TB03 319 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 CYGBQ8WWM9 190 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 FBXO32Q969P5 355 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 NPAS2Q99743 824 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 HACD3Q9P035 362 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 ADAMTSL1Q8N6G6 1762 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 SCN9AQ15858 1988 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 CAPN8A6NHC0 703 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 AP2A1O95782 977 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 TWF1Q12792 350 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 TMEM198Q66K66 360 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 ZNF333Q96JL9 665 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 FCRL2Q96LA5 508 aaPredicted RBP15.69■□□□□ 0.1
AP4E1-202ENST00000558439 RBBP8Q99708 897 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 ADAM2Q99965 735 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 CNGB3Q9NQW8 809 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 PPM1HQ9ULR3 514 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 RGSL1A5PLK6 1076 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 TFEBP19484 476 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 CD86P42081 329 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 ALDH1A3P47895 512 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 MAPRE1Q15691 268 aaKnown RBP15.69■□□□□ 0.1
AP4E1-202ENST00000558439 TRNP1Q6NT89 227 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
AP4E1-202ENST00000558439 FAM156AQ8NDB6 213 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 MAML3Q96JK9 1138 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 PRPF18Q99633 342 aaKnown RBP15.69■□□□□ 0.1
AP4E1-202ENST00000558439 CDH22Q9UJ99 828 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 DERAQ9Y315 318 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 RAP2CQ9Y3L5 183 aa15.69■□□□□ 0.1
AP4E1-202ENST00000558439 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
AP4E1-202ENST00000558439 SLCO1B7G3V0H7 640 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 DPYSL4O14531 572 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 NRP1O14786 923 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 SP100P23497 879 aaPredicted RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 LIMK2P53671 638 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 TIGD7Q6NT04 549 aaPredicted RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 MARK2Q7KZI7 788 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 FBXO27Q8NI29 283 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 HIC2Q96JB3 615 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 CCDC138Q96M89 665 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 HNRNPABQ99729 332 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 S100A14Q9HCY8 104 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 FAM105AQ9NUU6 356 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 MYL4P12829 197 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 CSE1LP55060 971 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 NCLNQ969V3 563 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 SKA1Q96BD8 255 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 TRIM15Q9C019 465 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 MRPL46Q9H2W6 279 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 CLIC5Q9NZA1 410 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 PGAP2Q9UHJ9 254 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 DSEQ9UL01 958 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 SCAMP3O14828 347 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 PROZP22891 400 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 TKTP29401 623 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 SLC9B1Q4ZJI4 515 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 ZRANB3Q5FWF4 1079 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 TEDDM1Q5T9Z0 273 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 DCP1BQ8IZD4 617 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 PHTF2Q8N3S3 785 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 TOP6BLQ8N6T0 577 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 OR52K2Q8NGK3 314 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 CDK5RAP2Q96SN8 1893 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 CD274Q9NZQ7 290 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 ADAM28Q9UKQ2 775 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 GOLGB1Q14789 3259 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 ARHGAP10A1A4S6 786 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 SAC3D1A6NKF1 404 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 F8W8V4 182 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 PEX2P28328 305 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 HADHAP40939 763 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 SCNN1BP51168 640 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 DYNC1I2Q13409 638 aaKnown RBP15.68■□□□□ 0.1
AP4E1-202ENST00000558439 SGO1Q5FBB7 561 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 LIPMQ5VYY2 423 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 OLFML2BQ68BL8 750 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 TAF2Q6P1X5 1199 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 CLEC20AQ6ZU45 233 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 OSTM1Q86WC4 334 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 BRD8Q9H0E9 1235 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 ING2Q9H160 280 aa15.68■□□□□ 0.1
AP4E1-202ENST00000558439 RGS18Q9NS28 235 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms