RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 AQP4P55087 323 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 SMIM11AP58511 58 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 ACTR3P61158 418 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 GCNT1Q02742 428 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 GRAPQ13588 217 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 CDH18Q13634 790 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 PRR5LQ6MZQ0 368 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 FCGR1BQ92637 280 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 DNAJC1Q96KC8 554 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 RBM4BQ9BQ04 359 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 RBM4Q9BWF3 364 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 KAT8Q9H7Z6 458 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 UGT1A7Q9HAW7 530 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 UGT1A10Q9HAW8 530 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 UGT1A8Q9HAW9 530 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 PNMA8BQ9ULN7 279 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 DGKBQ9Y6T7 804 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 GRIN2DO15399 1336 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 G3V2T6 193 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 KPNA5O15131 536 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 PGRMC2O15173 223 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 PLA2G6O60733 806 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZMPSTE24O75844 475 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 CRTAMO95727 393 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 CLCN2P51788 898 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 FNBP1LQ5T0N5 605 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 OR8H3Q8N146 312 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 CLHC1Q8NHS4 586 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 CENPNQ96H22 339 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZNF570Q96NI8 536 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 NODALQ96S42 347 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 PPP1R16BQ96T49 567 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 FAM53CQ9NYF3 392 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 CRLS1Q9UJA2 301 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 AP4E1Q9UPM8 1137 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 KPNA3O00505 521 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 GABBR2O75899 941 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 GPIP06744 558 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 MAPTP10636 758 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 SLC2A3P11169 496 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 NELFEP18615 380 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 MZF1P28698 734 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 TWF2Q6IBS0 349 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZNF549Q6P9A3 640 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 FOXR2Q6PJQ5 311 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 POTEHQ6S545 545 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 TMPRSS11AQ6ZMR5 421 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 SLFN11Q7Z7L1 901 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 HPS6Q86YV9 775 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 ARMC8Q8IUR7 673 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 TMEM139Q8IV31 216 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 ACTR8Q9H981 624 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 PTGFRNQ9P2B2 879 aa11.91□□□□□ -0.5
CSPG4P12-201ENST00000558282 FSCN2O14926 492 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 PEX11AO75192 247 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ITGAVP06756 1048 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 BPGMP07738 259 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 NAGLUP54802 743 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ADGRE1Q14246 886 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZNF423Q2M1K9 1284 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 NADK2Q4G0N4 442 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 KCTD8Q6ZWB6 473 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 METTL6Q8TCB7 284 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 HTR3CQ8WXA8 447 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 CIB1Q99828 191 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 FAM49AQ9H0Q0 323 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 HIPK3Q9H422 1215 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 NUP50Q9UKX7 468 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 UBQLN1Q9UMX0 589 aaKnown RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 LOC102724428A0A0B4J2F2 783 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 EME2A4GXA9 379 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 GPC1P35052 558 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 SIK1P57059 783 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 FGD3Q5JSP0 725 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 B3GALNT2Q8NCR0 500 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 UBA3Q8TBC4 463 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 REXO5Q96IC2 774 aaKnown RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 TOR4AQ9NXH8 423 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 DDX43Q9NXZ2 648 aaKnown RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 PLA2G4CQ9UP65 541 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 PCDHA11Q9Y5I1 949 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 TECPR2O15040 1411 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 PTPRMP28827 1452 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 A0A0B4J269 797 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 A0A0X1KG70 313 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZNF879B4DU55 563 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 PORP16435 677 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 RAB2AP61019 212 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ANGEL2Q5VTE6 544 aaKnown RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 VAT1Q99536 393 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 SMAD5Q99717 465 aaKnown RBP11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 ARMC7Q9H6L4 198 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
CSPG4P12-201ENST00000558282 RNF146Q9NTX7 359 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms