RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 UNC13CQ8NB66 2214 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SPTY2D1-AS1A0A0U1RR47 76 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 ENO4A6NNW6 628 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PIK3R2O00459 728 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 KPNA3O00505 521 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 FPGTO14772 594 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SART1O43290 800 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 ACTN4O43707 911 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 KLRC4O43908 158 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 BNIP3LO60238 219 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 CD2BP2O95400 341 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 PAK4O96013 591 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 PRNPP04156 253 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 ANXA6P08133 673 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 JMJD7P0C870 316 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 TRIM49P0CI25 452 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 TRIM49CP0CI26 452 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 LIPCP11150 499 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SLC2A3P11169 496 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 NME1P15531 152 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 NR2F2P24468 414 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 CHRNA3P32297 505 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 NOS2P35228 1153 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 UGT1A5P35504 534 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 RGS7P49802 495 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 METAP1P53582 386 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 ADKP55263 362 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 MCCD1P59942 119 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 RPS21P63220 83 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 KRT83P78385 493 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SGCGQ13326 291 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 MTA1Q13330 715 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PTK2BQ14289 1009 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 FZD2Q14332 565 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 NCAPHQ15003 741 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 STILQ15468 1287 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 TGIF1Q15583 401 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 CNGA2Q16280 664 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 NFIL3Q16649 462 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 DEFB133Q30KQ1 61 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 RABGAP1LQ5R372 815 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PERM1Q5SV97 790 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PIP5KL1Q5T9C9 394 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 TTC39BQ5VTQ0 682 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 RAP1GAP2Q684P5 730 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 KIAA1161Q6NSJ0 714 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PMF1Q6P1K2 205 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SHC4Q6S5L8 630 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 CRTC1Q6UUV9 634 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 LCLAT1Q6UWP7 414 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 KYAT3Q6YP21 454 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 GCNT7Q6ZNI0 430 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 ERN2Q76MJ5 926 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 PTAR1Q7Z6K3 402 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 ZSCAN30Q86W11 494 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PARGQ86W56 976 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 CCAR2Q8N163 923 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 SLC22A18ASQ8N1D0 253 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SH2D3CQ8N5H7 860 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 KIAA0895Q8NCT3 520 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 ZNF548Q8NEK5 533 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 DQX1Q8TE96 717 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 SCG3Q8WXD2 468 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 SEMA4DQ92854 862 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 TMEM159Q96B96 161 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 MYEOVQ96EZ4 313 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SLC39A13Q96H72 371 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PPP1R16AQ96I34 528 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 TMEM74Q96NL1 305 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 NOX5Q96PH1 765 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 LENG8Q96PV6 779 aaPredicted RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 GFM1Q96RP9 751 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 CCDC3Q9BQI4 270 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 FEM1AQ9BSK4 669 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 TRIM62Q9BVG3 475 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 BOCQ9BWV1 1114 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SLC13A1Q9BZW2 595 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 MIS12Q9H081 205 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SYNDIG1Q9H7V2 258 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 UPF2Q9HAU5 1272 aaKnown RBP5.31□□□□□ -1.56
SPG11-208ENST00000558155 LRRC4CQ9HCJ2 640 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 EPB41L5Q9HCM4 733 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 FZD3Q9NPG1 666 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.31□□□□□ -1.56
SPG11-208ENST00000558155 GULP1Q9UBP9 304 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 ACSL6Q9UKU0 697 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 DOLKQ9UPQ8 538 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 NAALADL1Q9UQQ1 740 aa5.31□□□□□ -1.56
SPG11-208ENST00000558155 PMS2P1A4D2B8 440 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 POM121BA6NF01 834 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 TCAF2A6NFQ2 919 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 KCNU1A8MYU2 1149 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 LMO7DNF2Z398 122 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 M0QYT0 321 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 O00370 1275 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 NTN3O00634 580 aaPredicted RBP5.3□□□□□ -1.56
SPG11-208ENST00000558155 YY2O15391 372 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 WFS1O76024 890 aa5.3□□□□□ -1.56
SPG11-208ENST00000558155 YEATS4O95619 227 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms