RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TULP3O75386 442 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 ZMPSTE24O75844 475 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 GLDCP23378 1020 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 HSPA9P38646 679 aaKnown RBP17.17■□□□□ 0.34
SNX1-203ENST00000558040 EIF2DP41214 584 aaKnown RBP17.17■□□□□ 0.34
SNX1-203ENST00000558040 VSNL1P62760 191 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 ARF5P84085 180 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 SLC10A7Q0GE19 358 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 MORF4L2Q15014 288 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 KCTD19Q17RG1 926 aaPredicted RBP17.17■□□□□ 0.34
SNX1-203ENST00000558040 FUT11Q495W5 492 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 INO80DQ53TQ3 878 aaPredicted RBP17.17■□□□□ 0.34
SNX1-203ENST00000558040 KIAA0907Q7Z7F0 614 aaPredicted RBP17.17■□□□□ 0.34
SNX1-203ENST00000558040 HOOK3Q86VS8 718 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 NT5MQ9NPB1 228 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 GTSE1Q9NYZ3 720 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 GRHL1Q9NZI5 618 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 MTRF1LQ9UGC7 380 aaKnown RBP17.17■□□□□ 0.34
SNX1-203ENST00000558040 LIMD1Q9UGP4 676 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 SLC25A13Q9UJS0 675 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 SHOC2Q9UQ13 582 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 TTLL3Q9Y4R7 772 aa17.17■□□□□ 0.34
SNX1-203ENST00000558040 OTOL1A6NHN0 477 aaPredicted RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 ARNTLO00327 626 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 ERLIN1O75477 346 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 METTL18O95568 372 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 HLA-DQB2P05538 268 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 CISD3P0C7P0 127 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 POLR2EP19388 210 aaKnown RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 NFKB1P19838 968 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 PSMB4P28070 264 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 GJA4P35212 333 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 LMAN1P49257 510 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 CARSP49589 748 aaKnown RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 NUMBP49757 651 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 ITGA8P53708 1063 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 PLTPP55058 493 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 SEMA5AQ13591 1074 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 AAK1Q2M2I8 961 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 GAB4Q2WGN9 574 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 MAP9Q49MG5 647 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 RNASEH2BQ5TBB1 312 aaKnown RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 ASTLQ6HA08 431 aaPredicted RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 CCNI2Q6ZMN8 369 aaPredicted RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 LEKR1Q6ZMV7 388 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 C12orf40Q86WS4 652 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 TAB3Q8N5C8 712 aaPredicted RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 CNTD1Q8N815 330 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 ART4Q93070 314 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 POLR1EQ9GZS1 481 aaKnown RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 KCNK12Q9HB15 430 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 ETNK1Q9HBU6 452 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 GLOD4Q9HC38 313 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 ARGLU1Q9NWB6 273 aaPredicted RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 INTS6Q9UL03 887 aaKnown RBP17.16■□□□□ 0.34
SNX1-203ENST00000558040 ATP8A1Q9Y2Q0 1164 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 BRWD1Q9NSI6 2320 aa17.16■□□□□ 0.34
SNX1-203ENST00000558040 PSMD3O43242 534 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 ANXA9O76027 345 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 TMCC1O94876 653 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 ASLP04424 464 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 ATP5BP06576 529 aaKnown RBP17.15■□□□□ 0.34
SNX1-203ENST00000558040 CD68P34810 354 aaPredicted RBP17.15■□□□□ 0.34
SNX1-203ENST00000558040 SERPINH1P50454 418 aaKnown RBP17.15■□□□□ 0.34
SNX1-203ENST00000558040 ITKQ08881 620 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 BRD3Q15059 726 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 TRADDQ15628 312 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 FAXCQ5TGI0 409 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 MBLAC2Q68D91 279 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 HIBCHQ6NVY1 386 aaPredicted RBP17.15■□□□□ 0.34
SNX1-203ENST00000558040 LINGO4Q6UY18 593 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 NUDT18Q6ZVK8 323 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 ADIPOR2Q86V24 386 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 CPT1BQ92523 772 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 TTC17Q96AE7 1141 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 PSKH2Q96QS6 385 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 FCRL5Q96RD9 977 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 SLC25A51Q9H1U9 297 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 TRPV5Q9NQA5 729 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 EIF2B3Q9NR50 452 aaKnown RBP17.15■□□□□ 0.34
SNX1-203ENST00000558040 NFU1Q9UMS0 254 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 AAR2Q9Y312 384 aaKnown RBP17.15■□□□□ 0.34
SNX1-203ENST00000558040 FARP1Q9Y4F1 1045 aaPredicted RBP17.15■□□□□ 0.34
SNX1-203ENST00000558040 MYOFQ9NZM1 2061 aa17.15■□□□□ 0.34
SNX1-203ENST00000558040 ERI2A8K979 691 aaKnown RBP17.14■□□□□ 0.33
SNX1-203ENST00000558040 TIMM44O43615 452 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 APRTP07741 180 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 TPSB2P20231 275 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 CES1P23141 567 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 MAGEA6P43360 314 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 GEMP55040 296 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 SARNPP82979 210 aaKnown RBP17.14■□□□□ 0.33
SNX1-203ENST00000558040 CDK16Q00536 496 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 ECT2LQ008S8 904 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 KCNJ11Q14654 390 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 EIF4HQ15056 248 aaKnown RBP17.14■□□□□ 0.33
SNX1-203ENST00000558040 TPSAB1Q15661 275 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 GEN1Q17RS7 908 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 PPP1R21Q6ZMI0 780 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms