RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MYLKQ15746 1914 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 RRP8O43159 456 aaKnown RBP16.3■□□□□ 0.2
SCFD1-224ENST00000557713 ZMPSTE24O75844 475 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 HNRNPA2B1P22626 353 aaKnown RBP16.3■□□□□ 0.2
SCFD1-224ENST00000557713 AKT2P31751 481 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 BPIFB4P59827 614 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 TMEM259Q4ZIN3 620 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 C22orf39Q6P5X5 142 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 GCNT7Q6ZNI0 430 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 DPY19L3Q6ZPD9 716 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 BNIPLQ7Z465 357 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 ABI3BPQ7Z7G0 1075 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 XYLT1Q86Y38 959 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 SLC22A18ASQ8N1D0 253 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 OR7D4Q8NG98 312 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 FGF11Q92914 225 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 C18orf8Q96DM3 657 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 TNKS2Q9H2K2 1166 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 DYRK4Q9NR20 520 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 IL36AQ9UHA7 158 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 PAXBP1Q9Y5B6 917 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 HS3ST3A1Q9Y663 406 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 WASF2Q9Y6W5 498 aa16.3■□□□□ 0.2
SCFD1-224ENST00000557713 ILVBLA1L0T0 632 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 EIF4E1BA6NMX2 242 aaKnown RBP16.29■□□□□ 0.2
SCFD1-224ENST00000557713 BRINP1O60477 761 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 LEFTY1O75610 366 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 PIAS2O75928 621 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 PCDH8O95206 1070 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 MT-CO3P00414 261 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 CKMT1AP12532 417 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 OR1E1P30953 314 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 CLDN2P57739 230 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 DAB2P98082 770 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 SLC20A2Q08357 652 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 MAN2A1Q16706 1144 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 SEL1L3Q68CR1 1132 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 ZNF783Q6ZMS7 281 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 TFAP2DQ7Z6R9 452 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 ERICH1Q86X53 443 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 FAM174AQ8TBP5 190 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 BAP1Q92560 729 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 IFT43Q96FT9 208 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 BMFQ96LC9 184 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 HAPLN3Q96S86 360 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 CALN1Q9BXU9 219 aa16.29■□□□□ 0.2
SCFD1-224ENST00000557713 GCN1Q92616 2671 aaKnown RBP16.28■□□□□ 0.2
SCFD1-224ENST00000557713 FFAR2O15552 330 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 SRGAP2O75044 1071 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 CYP11B1P15538 503 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 ACTN2P35609 894 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 FLT3P36888 993 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 DRAP1Q14919 205 aaPredicted RBP16.28■□□□□ 0.2
SCFD1-224ENST00000557713 HS1BP3Q53T59 392 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 FAM102AQ5T9C2 384 aaPredicted RBP16.28■□□□□ 0.2
SCFD1-224ENST00000557713 CDCP2Q5VXM1 449 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 TRNP1Q6NT89 227 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 RETSATQ6NUM9 610 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 KDM7AQ6ZMT4 941 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 Q6ZSR6 202 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 TMC6Q7Z403 805 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 DCP2Q8IU60 420 aaKnown RBP16.28■□□□□ 0.2
SCFD1-224ENST00000557713 GRIN3AQ8TCU5 1115 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 PPP1R16AQ96I34 528 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 SPON2Q9BUD6 331 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 SLC17A9Q9BYT1 436 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 PDCL3Q9H2J4 239 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 NDST4Q9H3R1 872 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 GPR27Q9NS67 375 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 TMEM59LQ9UK28 342 aa16.28■□□□□ 0.2
SCFD1-224ENST00000557713 LY6G6EA0A0G2JKS1 128 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 TK2O00142 265 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 SCAMP1O15126 338 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 OPA1O60313 960 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 ENDOD1O94919 500 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 CD160O95971 181 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 PAK4O96013 591 aaPredicted RBP16.27■□□□□ 0.2
SCFD1-224ENST00000557713 L1CAMP32004 1257 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 RECQLP46063 649 aaPredicted RBP16.27■□□□□ 0.2
SCFD1-224ENST00000557713 SERPINH1P50454 418 aaKnown RBP16.27■□□□□ 0.2
SCFD1-224ENST00000557713 NEK3P51956 506 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 ARF5P84085 180 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 FGL2Q14314 439 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 TBC1D25Q3MII6 688 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 VWA3BQ502W6 1294 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 C2CD6Q53TS8 623 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 CARD16Q5EG05 197 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 FEM1CQ96JP0 617 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 APOLD1Q96LR9 279 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 NAA15Q9BXJ9 866 aaKnown RBP16.27■□□□□ 0.2
SCFD1-224ENST00000557713 ZYG11BQ9C0D3 744 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 NLGN3Q9NZ94 848 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 PCDHB1Q9Y5F3 818 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 FADS3Q9Y5Q0 445 aa16.27■□□□□ 0.2
SCFD1-224ENST00000557713 U3KQA8 63 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms