RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 RBM22Q9NW64 420 aaKnown RBP eCLIP24.18■■□□□ 1.46
SIX4-203ENST00000556952 DUS2Q9NX74 493 aaKnown RBP24.18■■□□□ 1.46
SIX4-203ENST00000556952 KIAA1522Q9P206 1035 aaPredicted RBP24.18■■□□□ 1.46
SIX4-203ENST00000556952 E7EVH7 732 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 ANHXE9PGG2 379 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 CACNG3O60359 315 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 TMEM63AO94886 807 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 APRTP07741 180 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 CD68P34810 354 aaPredicted RBP24.17■■□□□ 1.46
SIX4-203ENST00000556952 RFTN1Q14699 578 aaPredicted RBP24.17■■□□□ 1.46
SIX4-203ENST00000556952 ADGRG2Q8IZP9 1017 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 CNTD1Q8N815 330 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 WFDC5Q8TCV5 224 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 USP33Q8TEY7 942 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 FEM1AQ9BSK4 669 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 RPP25Q9BUL9 199 aaKnown RBP24.17■■□□□ 1.46
SIX4-203ENST00000556952 BBS2Q9BXC9 721 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 LINC00597Q9H2U6 94 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 ZFP14Q9HCL3 533 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 PLK2Q9NYY3 685 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 OR51B4Q9Y5P0 310 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 NUMBLQ9Y6R0 609 aa24.17■■□□□ 1.46
SIX4-203ENST00000556952 HEPACAM2A8MVW5 462 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 NFKB1P19838 968 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 HSPA9P38646 679 aaKnown RBP24.16■■□□□ 1.46
SIX4-203ENST00000556952 MMP13P45452 471 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 FAM182AQ5T1J6 154 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 DCAF4L2Q8NA75 395 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 MCUQ8NE86 351 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 GDAP1L1Q96MZ0 367 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 THG1LQ9NWX6 298 aaKnown RBP24.16■■□□□ 1.46
SIX4-203ENST00000556952 VPS28Q9UK41 221 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 TCRBV7S3A2A0A539 114 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 GOLGA6CA6NDK9 693 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 GOLGA6BA6NDN3 693 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 ERI2A8K979 691 aaKnown RBP24.16■■□□□ 1.46
SIX4-203ENST00000556952 NEDD8-MDP1E9PL57 170 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 PPFIA2O75334 1257 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 HLA-DQB2P05538 268 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 GOLGA6DP0CG33 693 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 CSKP41240 450 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 DHX9Q08211 1270 aaKnown RBP24.16■■□□□ 1.46
SIX4-203ENST00000556952 PRPSAP1Q14558 356 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 LBRQ14739 615 aaKnown RBP24.16■■□□□ 1.46
SIX4-203ENST00000556952 EML3Q32P44 896 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 SPDYCQ5MJ68 293 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 LY6G5CQ5SRR4 150 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 BBS5Q8N3I7 341 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 ALG14Q96F25 216 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 ZNF419Q96HQ0 510 aaPredicted RBP24.16■■□□□ 1.46
SIX4-203ENST00000556952 FCRL5Q96RD9 977 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 KXD1Q9BQD3 176 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 TXLNGYQ9BZA5 131 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 GLOD4Q9HC38 313 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 GOLGA6AQ9NYA3 693 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 UBA2Q9UBT2 640 aaPredicted RBP24.16■■□□□ 1.46
SIX4-203ENST00000556952 ATP8A1Q9Y2Q0 1164 aa24.16■■□□□ 1.46
SIX4-203ENST00000556952 MYOFQ9NZM1 2061 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 TNFRSF10AO00220 468 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 TYRP14679 529 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 MZF1P28698 734 aaPredicted RBP24.15■■□□□ 1.46
SIX4-203ENST00000556952 LMAN1P49257 510 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 ARL4CP56559 192 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 SARNPP82979 210 aaKnown RBP24.15■■□□□ 1.46
SIX4-203ENST00000556952 SLC10A7Q0GE19 358 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 LMAN2Q12907 356 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 HIF1AQ16665 826 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 TANGO2Q6ICL3 276 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 HDXQ7Z353 690 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 KLHDC8BQ8IXV7 354 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 C2orf49Q9BVC5 232 aaPredicted RBP24.15■■□□□ 1.46
SIX4-203ENST00000556952 SLC2A11Q9BYW1 496 aa24.15■■□□□ 1.46
SIX4-203ENST00000556952 CXorf51AA0A1B0GTR3 108 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 CBX4O00257 560 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 EIF3HO15372 352 aaKnown RBP eCLIP24.14■■□□□ 1.45
SIX4-203ENST00000556952 NFATC1O95644 943 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 ADH1CP00326 375 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 PLK1P53350 603 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 ZNF235Q14590 738 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 CENPUQ71F23 418 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 CCDC25Q86WR0 208 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 RELL1Q8IUW5 271 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 ATP2A3Q93084 1043 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 ACDQ96AP0 544 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 PLA2G2FQ9BZM2 168 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 ZNF446Q9NWS9 450 aa24.14■■□□□ 1.45
SIX4-203ENST00000556952 PSMD3O43242 534 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 ATP8B1O43520 1251 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 GEMIN4P57678 1058 aaKnown RBP24.13■■□□□ 1.45
SIX4-203ENST00000556952 CBLBQ13191 982 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 CASP8Q14790 479 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 PDGFRLQ15198 375 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 DHCR24Q15392 516 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 MTSS1LQ765P7 747 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 MFSD6LQ8IWD5 586 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 PDIK1LQ8N165 341 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 ELSPBP1Q96BH3 223 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 LMLNQ96KR4 655 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 RBM15Q96T37 977 aaKnown RBP eCLIP24.13■■□□□ 1.452e-7■■■■■ 29.1
SIX4-203ENST00000556952 GORASP1Q9BQQ3 440 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms