RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 SUN1O94901 812 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 HPDP32754 393 aaPredicted RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 ATP1A2P50993 1020 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 RENBPP51606 427 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CDK16Q00536 496 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 LBRQ14739 615 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 PCSK7Q16549 785 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CASC4Q6P4E1 433 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 TRMT10BQ6PF06 316 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 LINGO4Q6UY18 593 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CHST9Q7L1S5 443 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 FAM217AQ8IXS0 508 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 DDI1Q8WTU0 396 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 SMG7Q92540 1137 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 NSMCE3Q96MG7 304 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 EBNA1BP2Q99848 306 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 MUC3BQ9H195 1237 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 MAGEH1Q9H213 219 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 LINC00597Q9H2U6 94 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 PIDD1Q9HB75 910 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 ATP13A1Q9HD20 1204 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 ZDHHC7Q9NXF8 308 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 IL1RAPL1Q9NZN1 696 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 HELZP42694 1942 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CBX4O00257 560 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 RGS16O15492 202 aaPredicted RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 LINC01565O15544 149 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CPP00450 1065 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 MMP2P08253 660 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CREB1P16220 341 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CHRNA4P43681 627 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 MMP13P45452 471 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 KCNC3Q14003 757 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 ANO4Q32M45 955 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 C6orf118Q5T5N4 469 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 RNF135Q8IUD6 432 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 TEX26Q8N6G2 289 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 DNAAF3Q8N9W5 541 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 LRRC3BQ96PB8 259 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 DDX50Q9BQ39 737 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 FRMD8Q9BZ67 464 aaPredicted RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 CASS4Q9NQ75 786 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 SMYD2Q9NRG4 433 aa14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 MRPS23Q9Y3D9 190 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-212ENST00000556639 C2orf16Q68DN1 1984 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 ILVBLA1L0T0 632 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 CCDC78A2IDD5 438 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 CXorf49A8MYA2 514 aaPredicted RBP14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 LATS1O95835 1130 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 C1QAP02745 245 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 CD86P42081 329 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 RGRP47804 291 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 CBLBQ13191 982 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 STAT4Q14765 748 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 MICALCLQ6ZW33 695 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 ARID3BQ8IVW6 561 aaPredicted RBP14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 HJURPQ8NCD3 748 aaPredicted RBP14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 TLCD1Q96CP7 247 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 EXOC2Q96KP1 924 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 MRGPRX2Q96LB1 330 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 FICDQ9BVA6 458 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 ACE2Q9BYF1 805 aaPredicted RBP14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 ROPN1BQ9BZX4 212 aaPredicted RBP14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 ROPN1Q9HAT0 212 aaPredicted RBP14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 TDP1Q9NUW8 608 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 EURLQ9NYK6 297 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 ADAM21Q9UKJ8 722 aa14.05□□□□□ -0.16
EFCAB11-212ENST00000556639 SDR42E2A6NKP2 422 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 KDELR3O43731 214 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 ATP9BO43861 1147 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 LUC7L3O95232 432 aaKnown RBP14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 CD160O95971 181 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 MLNP12872 115 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 CSKP41240 450 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 OXCT1P55809 520 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 ARF5P84085 180 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 PRPSAP1Q14558 356 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 RAB30Q15771 203 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 KBTBD12Q3ZCT8 623 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 ARHGAP15Q53QZ3 475 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 AGBL2Q5U5Z8 902 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 TTC19Q6DKK2 380 aaPredicted RBP14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 DENND5AQ6IQ26 1287 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 RTL10Q7L3V2 364 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 SETD3Q86TU7 594 aaPredicted RBP14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 TMEM25Q86YD3 366 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 KLHDC8BQ8IXV7 354 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 APCDD1Q8J025 514 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 ARRDC2Q8TBH0 407 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 STAMBPL1Q96FJ0 436 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 PGM2Q96G03 612 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 SLC17A6Q9P2U8 582 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 BPTFQ12830 3046 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 HMGB1P1B2RPK0 211 aaPredicted RBP14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 UGT1A9O60656 530 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 TCEA3O75764 348 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 FAM155BO75949 473 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 GLP2RO95838 553 aa14.04□□□□□ -0.16
EFCAB11-212ENST00000556639 TNFAIP8L3Q5GJ75 292 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms