RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 WDR78Q5VTH9 848 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 FOXB2Q5VYV0 432 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PLA2G4FQ68DD2 849 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 DNAJC24Q6P3W2 148 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TUBA3EQ6PEY2 450 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CENPUQ71F23 418 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 LARP4Q71RC2 724 aaKnown RBP eCLIP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 OVCH1Q7RTY7 1134 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PCGF5Q86SE9 256 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TBC1D1Q86TI0 1168 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SLC47A2Q86VL8 602 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TMPRSS6Q8IU80 811 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SRRM1Q8IYB3 904 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ZSWIM2Q8NEG5 633 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ATL2Q8NHH9 583 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 IL17DQ8TAD2 202 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 GDAP1Q8TB36 358 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 DEPTORQ8TB45 409 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 C1orf54Q8WWF1 131 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TBC1D31Q96DN5 1066 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SAAL1Q96ER3 474 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 CDHR1Q96JP9 859 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 MAGEB18Q96M61 343 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ANKRD27Q96NW4 1050 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 DEFB118Q96PH6 123 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF317Q96PQ6 595 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 OR14A2Q96R54 314 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 SMC6Q96SB8 1091 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 FIZ1Q96SL8 496 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 FAM213AQ9BRX8 229 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 STRA6Q9BX79 667 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TTYH1Q9H313 450 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 NOD2Q9HC29 1040 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 BATF3Q9NR55 127 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 DDX56Q9NY93 547 aaKnown RBP4.58□□□□□ -1.68
ATXN3-241ENST00000556374 IP6K2Q9UHH9 426 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 LGALS13Q9UHV8 139 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 MCM8Q9UJA3 840 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 TBX20Q9UMR3 447 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 AGTPBP1Q9UPW5 1226 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PCDHB2Q9Y5E7 798 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PCDHA9Q9Y5H5 950 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PPP2R3BQ9Y5P8 575 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ZHX2Q9Y6X8 837 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 PTPRFP10586 1907 aa4.58□□□□□ -1.68
ATXN3-241ENST00000556374 ZDBF2Q9HCK1 2354 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 FAM47DPA6NHR8 397 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 RASA4BC9J798 803 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 DNM1LO00429 736 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 RASA4O43374 803 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 EXTL3O43909 919 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 STAM2O75886 525 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PROSCO94903 275 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 OAS1P00973 400 aaKnown RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 LMNAP02545 664 aaKnown RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ADRB2P07550 413 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 SRGAP2CP0DJJ0 459 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ATF7P17544 494 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 TNNI1P19237 187 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 IBSPP21815 317 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 HOXD10P28358 340 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PSMC4P43686 418 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 KCNJ1P48048 391 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PEX5P50542 639 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 AP3M2P53677 418 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 POLGP54098 1239 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 IFI35P80217 286 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ALDH6A1Q02252 535 aaKnown RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PRKCZQ05513 592 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 RNASELQ05823 741 aaKnown RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 CCDC15Q0P6D6 951 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 RIPK1Q13546 671 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ACVR2BQ13705 512 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 TNFAIP1Q13829 316 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 CRYMQ14894 314 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PSMD6Q15008 389 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 CCNG2Q16589 344 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 GAGE13Q4V321 117 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 BRDTQ58F21 947 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 WLSQ5T9L3 541 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 HHATQ5VTY9 493 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 SLFN12LQ6IEE8 588 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 AADACL2Q6P093 401 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 MIS18BP1Q6P0N0 1132 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 KLHDC10Q6PID8 442 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PIGWQ7Z7B1 504 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 EXOC3L1Q86VI1 746 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PALB2Q86YC2 1186 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 CBWD2Q8IUF1 395 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 LMNTD2Q8IXW0 634 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 KATNAL2Q8IYT4 538 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ANKRD13AQ8IZ07 590 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 MCOLN2Q8IZK6 566 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 CPXCR1Q8N123 301 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 DAW1Q8N136 415 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ARHGAP24Q8N264 748 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ZCCHC9Q8N567 271 aaKnown RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 EXD1Q8NHP7 514 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 LMO3Q8TAP4 145 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ACER1Q8TDN7 264 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms