RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ZCCHC14Q8WYQ9 949 aaKnown RBP4.91□□□□□ -1.62
ATXN3-237ENST00000556274 SUSD6Q92537 303 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 TAF4BQ92750 862 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 FGF13Q92913 245 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 MYLPFQ96A32 169 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 E2F7Q96AV8 911 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 CYFIP2Q96F07 1278 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 TNIP3Q96KP6 325 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 CNOT6LQ96LI5 555 aaKnown RBP4.91□□□□□ -1.62
ATXN3-237ENST00000556274 NT5C1BQ96P26 610 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 KCNC2Q96PR1 638 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 RTP3Q9BQQ7 232 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 B3GNT5Q9BYG0 378 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 SDCBP2Q9H190 292 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 VPS16Q9H269 839 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 SMOC2Q9H3U7 446 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 UBE2TQ9NPD8 197 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-237ENST00000556274 FAM49BQ9NUQ9 324 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 ANO10Q9NW15 660 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 CHORDC1Q9UHD1 332 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-237ENST00000556274 CA14Q9ULX7 337 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 MAFFQ9ULX9 164 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 YIPF1Q9Y548 306 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 SPO11Q9Y5K1 396 aa4.91□□□□□ -1.62
ATXN3-237ENST00000556274 FAM170AA1A519 330 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 KCNJ18B7U540 433 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 GABRDO14764 452 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 DCXO43602 365 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 NARSO43776 548 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 N4BP1O75113 896 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 TACC1O75410 805 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 FKBP9O95302 570 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 VNN2O95498 520 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 MPIG6BO95866 241 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 C1RP00736 705 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 ASS1P00966 412 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CALCAP01258 141 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CSH1P0DML2 217 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CSH2P0DML3 217 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CCDC130P13994 396 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CEBPBP17676 345 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 PTMSP20962 102 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 SOX5P35711 763 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 VIPR2P41587 438 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 FNTBP49356 437 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 MAP3K7CLP57077 242 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 YWHAEP62258 255 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 ZXDAP98168 799 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 OCRLQ01968 901 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 SMARCB1Q12824 385 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 TDGQ13569 410 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 KCNJ12Q14500 433 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 STX1AQ16623 288 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 SLC5A9Q2M3M2 681 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CBWD6Q4V339 395 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 ZCWPW2Q504Y3 356 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 COBLL1Q53SF7 1204 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CBWD3Q5JTY5 395 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CBWD5Q5RIA9 395 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 TXNDC8Q6A555 127 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 TANGO2Q6ICL3 276 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 FAM171BQ6P995 826 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 PARM1Q6UWI2 310 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 FKBP9P1Q75LS8 142 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 RTL10Q7L3V2 364 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 FAM124AQ86V42 546 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 C11orf74Q86VG3 221 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 SLC44A3Q8N4M1 653 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 B3GALNT2Q8NCR0 500 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 ANKRD20A12PQ8NF67 263 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 NUDT10Q8NFP7 164 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CXorf38Q8TB03 319 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 UBA3Q8TBC4 463 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CALML6Q8TD86 181 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 SLC2A14Q8TDB8 520 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 KBTBD7Q8WVZ9 684 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 MRPS31Q92665 395 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 USP7Q93009 1102 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 FOXRED1Q96CU9 486 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 NUDT11Q96G61 164 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 PCED1BQ96HM7 432 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 LCORQ96JN0 433 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CYP2S1Q96SQ9 504 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 KCNK16Q96T55 309 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 RPP25Q9BUL9 199 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 BTBD2Q9BX70 525 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 ZNF518BQ9C0D4 1074 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 NACA2Q9H009 215 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 NAT10Q9H0A0 1025 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 XYLT2Q9H1B5 865 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 PDCL3Q9H2J4 239 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CYP3A43Q9HB55 503 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 APOBEC3GQ9HC16 384 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 ZFP14Q9HCL3 533 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 ZNF334Q9HCZ1 680 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CISHQ9NSE2 258 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 SAMSN1Q9NSI8 373 aaKnown RBP4.9□□□□□ -1.63
ATXN3-237ENST00000556274 SPTLC3Q9NUV7 552 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 CDH7Q9ULB5 785 aa4.9□□□□□ -1.63
ATXN3-237ENST00000556274 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms