RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CASS4Q9NQ75 786 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TLR8Q9NR97 1041 aaKnown RBP8.48□□□□□ -1.05
ATXN3-235ENST00000556082 GMIPQ9P107 970 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TBK1Q9UHD2 729 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 SFMBT1Q9UHJ3 866 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 TTLL3Q9Y4R7 772 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 PCDHA11Q9Y5I1 949 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 HS3ST4Q9Y661 456 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 NLRC5Q86WI3 1866 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 PTPRDP23468 1912 aa8.48□□□□□ -1.05
ATXN3-235ENST00000556082 E9PAM4 449 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 KCNK1O00180 336 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 MATN3O15232 486 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 KRT37O76014 449 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ABLIM3O94929 683 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ZWINTO95229 277 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ASMTLO95671 621 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 INHBAP08476 426 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 CPB1P15086 417 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 PGAM1P18669 254 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 KRT15P19012 456 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 CNTFP26441 200 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 PSMB4P28070 264 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 CD68P34810 354 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 CCT5P48643 541 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 NPY2RP49146 381 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 GPR15P49685 360 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 SERPINB9P50453 376 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 NDST2P52849 883 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 SLC18A2Q05940 514 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TNK2Q07912 1038 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TAF10Q12962 218 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 DNAJC3Q13217 504 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 CCINQ13939 588 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 PRPSAP1Q14558 356 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 KBTBD12Q3ZCT8 623 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 C5orf22Q49AR2 442 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 GKAP1Q5VSY0 366 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TTC39BQ5VTQ0 682 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TPGS2Q68CL5 300 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TIGD7Q6NT04 549 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 RWDD4Q6NW29 188 aaKnown RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TIFABQ6ZNK6 161 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TAS1R1Q7RTX1 841 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 YTHDF3Q7Z739 585 aaKnown RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 CPLX4Q7Z7G2 160 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TMEM173Q86WV6 379 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ARHGAP12Q8IWW6 846 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TP53INP2Q8IXH6 220 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ATP6V0D2Q8N8Y2 350 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 PDZD8Q8NEN9 1154 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 BCL7CQ8WUZ0 217 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ARNTL2Q8WYA1 636 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 BHMTQ93088 406 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 FBXO32Q969P5 355 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 AZIN2Q96A70 460 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF689Q96CS4 500 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 MTBPQ96DY7 904 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF333Q96JL9 665 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 BTN2A3PQ96KV6 586 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 MYRFLQ96LU7 910 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 MAGEB18Q96M61 343 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 IL12RB2Q99665 862 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 PRMT1Q99873 361 aaKnown RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 GORASP1Q9BQQ3 440 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 PRDM5Q9NQX1 630 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 TMEM39AQ9NV64 488 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 MARCH2Q9P0N8 246 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 KLHL8Q9P2G9 620 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 STK39Q9UEW8 545 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 AFF4Q9UHB7 1163 aaKnown RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 PRDM4Q9UKN5 801 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 HBS1LQ9Y450 684 aaKnown RBP8.47□□□□□ -1.05
ATXN3-235ENST00000556082 SNX10Q9Y5X0 201 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 IKBKGQ9Y6K9 419 aa8.47□□□□□ -1.05
ATXN3-235ENST00000556082 SLC38A8A6NNN8 435 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 KIAA0355O15063 1070 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 TM9SF1O15321 606 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 MSI1O43347 362 aaKnown RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 MAFKO60675 156 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 KRT38O76015 456 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 JCHAINP01591 159 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 MT-ND3P03897 115 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SOD2P04179 222 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SNRPAP09012 282 aaKnown RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CLTBP09497 229 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SRGAP2BP0DMP2 458 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 CCNB1P14635 433 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 KRT4P19013 534 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 GBP2P32456 591 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-235ENST00000556082 GRIA1P42261 906 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 GJA8P48165 433 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 PPP3CCP48454 512 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 IL9RQ01113 521 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 DSG1Q02413 1049 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 DUSP4Q13115 394 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 SPARCL1Q14515 664 aa8.46□□□□□ -1.06
ATXN3-235ENST00000556082 MGAT5BQ3V5L5 792 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms