RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SCML1Q9UN30 329 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 PACSIN2Q9UNF0 486 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 SAR1BQ9Y6B6 198 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 SDK1Q7Z5N4 2213 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 ABCA7Q8IZY2 2146 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 DCDC2BA2VCK2 349 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 MEI4A8MW99 385 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 E9PAM4 449 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 CDX4O14627 284 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-215ENST00000555616 ATP9BO43861 1147 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 CNTN5O94779 1100 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 DNTTP04053 509 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 KRT1P04264 644 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 SERPINF2P08697 491 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 PRLRP16471 622 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 ENGP17813 658 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 TAS2R40P59535 323 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 IRX4P78413 519 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 NRG1Q02297 640 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-215ENST00000555616 SLC25A11Q02978 314 aaKnown RBP9.85□□□□□ -0.83
ACTN1-215ENST00000555616 TUBB2AQ13885 445 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 CST6Q15828 149 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 DUOXA1Q1HG43 343 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 EFHC2Q5JST6 749 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 WDR45BQ5MNZ6 344 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 SYCP2LQ5T4T6 812 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 MANEALQ5VSG8 457 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 DAB2IPQ5VWQ8 1189 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 LRRC31Q6UY01 552 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 USP30Q70CQ3 517 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 SETD3Q86TU7 594 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-215ENST00000555616 CPNE8Q86YQ8 564 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 MAP7D3Q8IWC1 876 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 KATNAL2Q8IYT4 538 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 ARFGAP1Q8N6T3 406 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 DCAF4L2Q8NA75 395 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 FRS2Q8WU20 508 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 NTAN1Q96AB6 310 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 RBM41Q96IZ5 413 aaKnown RBP9.85□□□□□ -0.83
ACTN1-215ENST00000555616 PBKQ96KB5 322 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 TUBB2BQ9BVA1 445 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 GPR174Q9BXC1 333 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 NUSAP1Q9BXS6 441 aaKnown RBP9.85□□□□□ -0.83
ACTN1-215ENST00000555616 CARD9Q9H257 536 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 PABPC3Q9H361 631 aaKnown RBP9.85□□□□□ -0.83
ACTN1-215ENST00000555616 ZWILCHQ9H900 591 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 TMEM9BQ9NQ34 198 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 SLCO3A1Q9UIG8 710 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 VPS28Q9UK41 221 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 SLC6A14Q9UN76 642 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 NEU3Q9UQ49 428 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 HS3ST2Q9Y278 367 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 SNX10Q9Y5X0 201 aa9.85□□□□□ -0.83
ACTN1-215ENST00000555616 THADAQ6YHU6 1953 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 PCDH15Q96QU1 1955 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 NUP205Q92621 2012 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 CEP295Q9C0D2 2601 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 SPTBN2O15020 2390 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 C4orf47A7E2U8 309 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 METTL12A8MUP2 240 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 C10orf142B7Z368 130 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 CES2O00748 559 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 DDX3YO15523 660 aaKnown RBP9.84□□□□□ -0.83
ACTN1-215ENST00000555616 RNASEH1O60930 286 aaKnown RBP9.84□□□□□ -0.83
ACTN1-215ENST00000555616 URI1O94763 535 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-215ENST00000555616 ZRANB2O95218 330 aaKnown RBP eCLIP9.84□□□□□ -0.83
ACTN1-215ENST00000555616 CFIP05156 583 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 RHOCP08134 193 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 IL1R2P27930 398 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 ACSL1P33121 698 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 NNMTP40261 264 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 MARCKSL1P49006 195 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 PEX5P50542 639 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF135P52742 658 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-215ENST00000555616 TERF1P54274 439 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 SCAPQ12770 1279 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 KRT81Q14533 505 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 SMTNL2Q2TAL5 461 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 RAB6CQ53S08 254 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 PPM1JQ5JR12 505 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 C6orf118Q5T5N4 469 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 ERMARDQ5T6L9 678 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 SEL1L2Q5TEA6 688 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF783Q6ZMS7 281 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 TFAP2DQ7Z6R9 452 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 FAM124AQ86V42 546 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 CCDC50Q8IVM0 306 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 RCOR2Q8IZ40 523 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 KCTD6Q8NC69 237 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 EXD1Q8NHP7 514 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 HSPH1Q92598 858 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 ALG3Q92685 438 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 KRT35Q92764 455 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 PTPRN2Q92932 1015 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 FAM131CQ96AQ9 280 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 RPL10LQ96L21 214 aaKnown RBP9.84□□□□□ -0.83
ACTN1-215ENST00000555616 OSBPL9Q96SU4 736 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 PSMB7Q99436 277 aa9.84□□□□□ -0.83
ACTN1-215ENST00000555616 SNRNP25Q9BV90 132 aaKnown RBP9.84□□□□□ -0.83
ACTN1-215ENST00000555616 C2orf49Q9BVC5 232 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms