RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 HHATQ5VTY9 493 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 Q6ZNB5 142 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 CYP4V2Q6ZWL3 525 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 FBXO36Q8NEA4 188 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 ZNF398Q8TD17 642 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 LRRC8CQ8TDW0 803 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 NXPE3Q969Y0 559 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 E2F7Q96AV8 911 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 FCRL2Q96LA5 508 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 SERPINB11Q96P15 392 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.74■□□□□ 0.43
SHOX-204ENST00000554971 VPS13AQ96RL7 3174 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 USP34Q70CQ2 3546 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 SYNJ2BP-COX16A0A087WUM0 186 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 M0QYT0 321 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 UBOX5O94941 541 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 SDC4P31431 198 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 ELF3P78545 371 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 KRT81Q14533 505 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 ANKRD22Q5VYY1 191 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 SLC9A4Q6AI14 798 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 TRIM68Q6AZZ1 485 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 FAF2Q96CS3 445 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 LRRC39Q96DD0 335 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 PGAP3Q96FM1 320 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 P2RY11Q96G91 374 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 PEBP4Q96S96 227 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 UHRF1Q96T88 793 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 FAM83CQ9BQN1 747 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 ZNF670Q9BS34 389 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 TACO1Q9BSH4 297 aaKnown RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 VPS11Q9H270 941 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 LINC00597Q9H2U6 94 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 ANLNQ9NQW6 1124 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 DDIT4Q9NX09 232 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 COX16Q9P0S2 106 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 TLR6Q9Y2C9 796 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 HBS1LQ9Y450 684 aaKnown RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 WNT6Q9Y6F9 365 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 USH1CQ9Y6N9 552 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 MIA3Q5JRA6 1907 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 IQANK1A0A1B0GTG1 560 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 OTOL1A6NHN0 477 aaPredicted RBP17.73■□□□□ 0.43
SHOX-204ENST00000554971 PTPN9P43378 593 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 SULT1E1P49888 294 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 ATP11AP98196 1134 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 KCNJ11Q14654 390 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 SETDB1Q15047 1291 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 HTR3DQ70Z44 454 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 BBS7Q8IWZ6 715 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 FBF1Q8TES7 1133 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 DEPDC1BQ8WUY9 529 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 CENPIQ92674 756 aaPredicted RBP17.73■□□□□ 0.43
SHOX-204ENST00000554971 MLXIPLQ9NP71 852 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 DOCK4Q8N1I0 1966 aa17.73■□□□□ 0.43
SHOX-204ENST00000554971 FOXO6A8MYZ6 492 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 TRDMT1O14717 391 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 APOL1O14791 398 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 EDF1O60869 148 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 DCTN3O75935 186 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 TBX4P57082 545 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 BASP1P80723 227 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 RING1Q06587 406 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 TNK2Q07912 1038 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 NME3Q13232 169 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 CDO1Q16878 200 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 FAM133BQ5BKY9 247 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 IER5LQ5T953 404 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 ANKMY2Q8IV38 441 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 PLD5Q8N7P1 536 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 PAFAH2Q99487 392 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 USP29Q9HBJ7 922 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 MUTYHQ9UIF7 546 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 STAP1Q9ULZ2 295 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 PHTF1Q9UMS5 762 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 MYO15AQ9UKN7 3530 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 E2F8A0AVK6 867 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 GOLGA8MH3BSY2 632 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 H7C0C1 242 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 TMEM63AO94886 807 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 KRT4P19013 534 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 SSTR1P30872 391 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 CORO1AP31146 461 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 GDI1P31150 447 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 RPA3P35244 121 aaPredicted RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 ATP5OP48047 213 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 NR2C2P49116 596 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 HDAC4P56524 1084 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 NCALDP61601 193 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 TDGQ13569 410 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 SEPT7Q16181 437 aaKnown RBP17.72■□□□□ 0.43
SHOX-204ENST00000554971 EML3Q32P44 896 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 BBS9Q3SYG4 887 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 MSS51Q4VC12 460 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 CGB2Q6NT52 195 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 MCUQ8NE86 351 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 DCAKDQ8WVC6 231 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 OSCP1Q8WVF1 389 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 PLD4Q96BZ4 506 aa17.72■□□□□ 0.43
SHOX-204ENST00000554971 PAIP2Q9BPZ3 127 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms