RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 IRGQQ8WZA9 623 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 FIS1Q9Y3D6 152 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 SQORQ9Y6N5 450 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 BCLAF3A2AJT9 711 aaKnown RBP16.84■□□□□ 0.29
PCNX1-209ENST00000554879 ZBTB24O43167 697 aaPredicted RBP16.84■□□□□ 0.29
PCNX1-209ENST00000554879 GLUD2P49448 558 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 CDH18Q13634 790 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 MBTPS1Q14703 1052 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 RNF19BQ6ZMZ0 732 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 ZNF554Q86TJ5 538 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 NUDCD3Q8IVD9 361 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 SCUBE1Q8IWY4 988 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 COLGALT2Q8IYK4 626 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 PPP4R1Q8TF05 950 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 PTPRN2Q92932 1015 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 TCRBV9S1A1TA0A576 114 aa16.83■□□□□ 0.29
PCNX1-209ENST00000554879 NOL3O60936 208 aaKnown RBP16.83■□□□□ 0.29
PCNX1-209ENST00000554879 ERVK-10P10266 1014 aa16.83■□□□□ 0.29
PCNX1-209ENST00000554879 XKR4Q5GH76 650 aa16.83■□□□□ 0.29
PCNX1-209ENST00000554879 RTP2Q5QGT7 225 aa16.83■□□□□ 0.29
PCNX1-209ENST00000554879 AGR3Q8TD06 166 aa16.83■□□□□ 0.29
PCNX1-209ENST00000554879 DDI1Q8WTU0 396 aa16.83■□□□□ 0.29
PCNX1-209ENST00000554879 DPF3Q92784 378 aa16.83■□□□□ 0.29
PCNX1-209ENST00000554879 IRAK2O43187 625 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 SCNN1AP37088 669 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 EIF2B2P49770 351 aaKnown RBP16.83■□□□□ 0.28
PCNX1-209ENST00000554879 C16orf72Q14CZ0 275 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 TTC39BQ5VTQ0 682 aaPredicted RBP16.83■□□□□ 0.28
PCNX1-209ENST00000554879 ZNF567Q8N184 647 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 LRRC40Q9H9A6 602 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 SPG21Q9NZD8 308 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 SLC24A2Q9UI40 661 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 TSR3Q9UJK0 312 aaKnown RBP16.83■□□□□ 0.28
PCNX1-209ENST00000554879 PHF24Q9UPV7 400 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 SSX2IPQ9Y2D8 614 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 A0A1W2PPM1 405 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 KDM1AO60341 852 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 KRT36O76013 467 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 PHEXP78562 749 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 DSC3Q14574 896 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 CNPY1Q3B7I2 92 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 MSS51Q4VC12 460 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 SPDYCQ5MJ68 293 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 SLC39A5Q6ZMH5 540 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 QKIQ96PU8 341 aaKnown RBP eCLIP16.83■□□□□ 0.282e-8■■■□□ 18.9
PCNX1-209ENST00000554879 TRIM56Q9BRZ2 755 aaKnown RBP16.83■□□□□ 0.28
PCNX1-209ENST00000554879 RXFP1Q9HBX9 757 aa16.83■□□□□ 0.28
PCNX1-209ENST00000554879 IARS2Q9NSE4 1012 aaKnown RBP16.83■□□□□ 0.28
PCNX1-209ENST00000554879 MARCOQ9UEW3 520 aaPredicted RBP16.83■□□□□ 0.28
PCNX1-209ENST00000554879 AAR2Q9Y312 384 aaKnown RBP16.83■□□□□ 0.28
PCNX1-209ENST00000554879 RHOCP08134 193 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 FAM163BP0C2L3 166 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 PGM1P36871 562 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 CCDC15Q0P6D6 951 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 SLC10A2Q12908 348 aaPredicted RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 BRMS1LQ5PSV4 323 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 DCLK2Q8N568 766 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 MCUQ8NE86 351 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 CCSER2Q9H7U1 834 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 NMUR1Q9HB89 426 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 DNMT3LQ9UJW3 386 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 SLC39A10Q9ULF5 831 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 A6NHS1 94 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 E9PAM4 449 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 FAM155BO75949 473 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 OLIG2Q13516 323 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 CYTH1Q15438 398 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 TIGD7Q6NT04 549 aaPredicted RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 FIBCD1Q8N539 461 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 ZFAND2BQ8WV99 257 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 FAM136AQ96C01 138 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 EXOC2Q96KP1 924 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 ZYG11BQ9C0D3 744 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 UBA6A0AVT1 1052 aaPredicted RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 PTPN7P35236 360 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 GEMP55040 296 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 RABGAP1LQ5R372 815 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 LRRC74BQ6ZQY2 392 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 PSTKQ8IV42 348 aaKnown RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 SPATA22Q8NHS9 363 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 SEC14L1Q92503 715 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 FUBP3Q96I24 572 aaKnown RBP eCLIP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 MTIF3Q9H2K0 278 aaKnown RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 RCOR3Q9P2K3 495 aaPredicted RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 OVGP1Q12889 678 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 LBRQ14739 615 aaKnown RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 LZTR1Q8N653 840 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 SLC26A7Q8TE54 656 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 UNKQ9C0B0 810 aaKnown RBP16.82■□□□□ 0.28
PCNX1-209ENST00000554879 NPHS2Q9NP85 383 aa16.82■□□□□ 0.28
PCNX1-209ENST00000554879 BUD23O43709 281 aaKnown RBP16.81■□□□□ 0.28
PCNX1-209ENST00000554879 IVDP26440 423 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 CYP4X1Q8N118 509 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 SLC9A7Q96T83 725 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 CINPQ9BW66 212 aaPredicted RBP16.81■□□□□ 0.28
PCNX1-209ENST00000554879 ATP13A1Q9HD20 1204 aa16.81■□□□□ 0.28
PCNX1-209ENST00000554879 VPS28Q9UK41 221 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms