RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 STMN1P16949 149 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 CNTFP26441 200 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 RPL14P50914 215 aaKnown RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SCNN1GP51170 649 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 RAP1GDS1P52306 607 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 CNPY1Q3B7I2 92 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 OR52E8Q6IFG1 317 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 MARK2Q7KZI7 788 aaKnown RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 MYLK4Q86YV6 388 aaPredicted RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SCAMP5Q8TAC9 235 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SLC45A3Q96JT2 553 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SNX27Q96L92 541 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 BRCA2P51587 3418 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 FAM95CA0A1B0GW59 222 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 LIN7AO14910 233 aaPredicted RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SNNO75324 88 aaPredicted RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 CNMDO75829 334 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 ENDOD1O94919 500 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 OR4Q2P0C623 313 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 BRCC3P46736 316 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SCIMPQ6UWF3 145 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 FSTL5Q8N475 847 aaPredicted RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SNRNP27Q8WVK2 155 aaKnown RBP12.05□□□□□ -0.48
XRCC3-208ENST00000554811 DCUN1D1Q96GG9 259 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 Q9H521 79 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 PNPLA8Q9NP80 782 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 EPS15L1Q9UBC2 864 aa12.05□□□□□ -0.48
XRCC3-208ENST00000554811 SHROOM3Q8TF72 1996 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 HOXA11P31270 313 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-208ENST00000554811 GRIK1P39086 918 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 PTPN9P43378 593 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 TBCCQ15814 346 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 FUT11Q495W5 492 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 SPANXN3Q5MJ09 141 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 RBM44Q6ZP01 1051 aaKnown RBP12.04□□□□□ -0.48
XRCC3-208ENST00000554811 OR9I1Q8NGQ6 314 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 KBTBD7Q8WVZ9 684 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 PAAF1Q9BRP4 392 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 MROH8Q9H579 483 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 NT5MQ9NPB1 228 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-208ENST00000554811 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 AURKAO14965 403 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 TIMM44O43615 452 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 AHCYL1O43865 530 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 CCNG1P51959 295 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 LCA5Q86VQ0 697 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 HIC2Q96JB3 615 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 MRPL1Q9BYD6 325 aaKnown RBP12.04□□□□□ -0.48
XRCC3-208ENST00000554811 ABI2Q9NYB9 513 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-208ENST00000554811 NOD1Q9Y239 953 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 TTC3P53804 2025 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 FAM149AA5PLN7 773 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 OR51F1A6NGY5 319 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 F8W8V4 182 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 HDAC3O15379 428 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 PFDN1O60925 122 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 UQCRBP14927 111 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 LIMK2P53671 638 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-208ENST00000554811 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
XRCC3-208ENST00000554811 CCDC153Q494R4 210 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 BTBD8Q5XKL5 378 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 CLEC20AQ6ZU45 233 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 OR52K2Q8NGK3 314 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 PCED1BQ96HM7 432 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 NAT9Q9BTE0 207 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 DUSP16Q9BY84 665 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 EGFL7Q9UHF1 273 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 IPPQ9Y573 584 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 AP4B1Q9Y6B7 739 aa12.04□□□□□ -0.48
XRCC3-208ENST00000554811 AOC1P19801 751 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 CLCNKBP51801 687 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
XRCC3-208ENST00000554811 PLOD1Q02809 727 aaPredicted RBP12.03□□□□□ -0.48
XRCC3-208ENST00000554811 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 LAMB3Q13751 1172 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 ANO4Q32M45 955 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 CWF19L1Q69YN2 538 aaKnown RBP12.03□□□□□ -0.48
XRCC3-208ENST00000554811 NAPEPLDQ6IQ20 393 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 GPC2Q8N158 579 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 MYO1HQ8N1T3 1032 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 PQLC1Q8N2U9 271 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 ARRDC4Q8NCT1 418 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 PPHLN1Q8NEY8 458 aaKnown RBP12.03□□□□□ -0.48
XRCC3-208ENST00000554811 BLOC1S5Q8TDH9 187 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 PCDHGB4Q9UN71 923 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 RPL26L1Q9UNX3 145 aaKnown RBP12.03□□□□□ -0.48
XRCC3-208ENST00000554811 PCDHGB5Q9Y5G0 923 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 NR5A2O00482 541 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 DDHD2O94830 711 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 PRKCGP05129 697 aa12.03□□□□□ -0.48
XRCC3-208ENST00000554811 CDH17Q12864 832 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms