RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 ZDHHC17Q8IUH5 632 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 CHST14Q8NCH0 376 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 FAM174AQ8TBP5 190 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 GRIN3AQ8TCU5 1115 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 IFT43Q96FT9 208 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 DEPDC7Q96QD5 511 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 NPY6RQ99463 290 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 HDAC8Q9BY41 377 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 EVA1BQ9NVM1 165 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 TMEM51Q9NW97 253 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 NLGN3Q9NZ94 848 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 ZFR2Q9UPR6 939 aaKnown RBP12.76□□□□□ -0.37
RDH11-207ENST00000554731 A0A0D9SEW6 157 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 NEMP2A6NFY4 417 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 DRGXA6NNA5 263 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 A6NNZ2 444 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 FLNBO75369 2602 aaKnown RBP12.75□□□□□ -0.37
RDH11-207ENST00000554731 C1QL1O75973 258 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 F9P00740 461 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 TFE3P19532 575 aaPredicted RBP12.75□□□□□ -0.37
RDH11-207ENST00000554731 DUSP3P51452 185 aaPredicted RBP12.75□□□□□ -0.37
RDH11-207ENST00000554731 NEK3P51956 506 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 HNRNPKP61978 463 aaKnown RBP eCLIP12.75□□□□□ -0.37
RDH11-207ENST00000554731 DEUP1Q05D60 604 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 TMEM259Q4ZIN3 620 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 ACBD5Q5T8D3 534 aaPredicted RBP12.75□□□□□ -0.37
RDH11-207ENST00000554731 SEL1L3Q68CR1 1132 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 GCNT7Q6ZNI0 430 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 DPY19L3Q6ZPD9 716 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 PTAR1Q7Z6K3 402 aaPredicted RBP12.75□□□□□ -0.37
RDH11-207ENST00000554731 SLC47A2Q86VL8 602 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 DCP2Q8IU60 420 aaKnown RBP12.75□□□□□ -0.37
RDH11-207ENST00000554731 ZNF683Q8IZ20 524 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 NT5C3BQ969T7 300 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 PGAP3Q96FM1 320 aaPredicted RBP12.75□□□□□ -0.37
RDH11-207ENST00000554731 APOLD1Q96LR9 279 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 C1orf74Q96LT6 269 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 LGMNQ99538 433 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 DUSP23Q9BVJ7 150 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 TNKS2Q9H2K2 1166 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 USP29Q9HBJ7 922 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 PLCB1Q9NQ66 1216 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 ANLNQ9NQW6 1124 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 DNAJC28Q9NX36 388 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 MPP6Q9NZW5 540 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 PCDHB1Q9Y5F3 818 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 SNX10Q9Y5X0 201 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 HS3ST3A1Q9Y663 406 aa12.75□□□□□ -0.37
RDH11-207ENST00000554731 TDRD6O60522 2096 aaKnown RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 TRPM6Q9BX84 2022 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 IGLV3-10A0A075B6K4 115 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 ILVBLA1L0T0 632 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 I6L893 689 aaPredicted RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 FOXN3O00409 490 aaPredicted RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 SCAMP1O15126 338 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 LEFTY1O75610 366 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 ENDOD1O94919 500 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 GP1BAP07359 652 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 GIMD1P0DJR0 217 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 OR1E1P30953 314 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 CLCN1P35523 988 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 PCBP4P57723 403 aaKnown RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 BPIFB4P59827 614 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 RPS21P63220 83 aaKnown RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 CXADRP78310 365 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 CDCP2Q5VXM1 449 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 KIAA1161Q6NSJ0 714 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 RETSATQ6NUM9 610 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 ZNF783Q6ZMS7 281 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 Q6ZSR6 202 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 LSMEM2Q8N112 164 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 SLC22A18ASQ8N1D0 253 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 FAM181AQ8N9Y4 354 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 TMEM35BQ8NCS4 154 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 ZNF248Q8NDW4 579 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 OR7D4Q8NG98 312 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 FEM1CQ96JP0 617 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 ZNF578Q96N58 590 aaPredicted RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 TBCBQ99426 244 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 SPON2Q9BUD6 331 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 SLC17A9Q9BYT1 436 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 ABCG4Q9H172 646 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 SIX2Q9NPC8 291 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 DNAJC12Q9UKB3 198 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 AJAP1Q9UKB5 411 aaPredicted RBP12.74□□□□□ -0.37
RDH11-207ENST00000554731 WASF2Q9Y6W5 498 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 BPTFQ12830 3046 aa12.74□□□□□ -0.37
RDH11-207ENST00000554731 H3BM21 787 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 K7ESM1 405 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 RNF103O00237 685 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
RDH11-207ENST00000554731 USP12O75317 370 aa12.73□□□□□ -0.37
RDH11-207ENST00000554731 CSO75390 466 aaKnown RBP12.73□□□□□ -0.37
RDH11-207ENST00000554731 MPOP05164 745 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms