RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 A6NNZ2 444 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 BECN2A8MW95 431 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 SNAP91O60641 907 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 USP12O75317 370 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 CNTN5O94779 1100 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 MPOP05164 745 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 BMP6P22004 513 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 CLDN2P57739 230 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 RHDQ02161 417 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 MORC3Q14149 939 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 TAF1BQ53T94 588 aaPredicted RBP24.76■■□□□ 1.55
FOXA1-204ENST00000554607 ARSIQ5FYB1 569 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 ACBD5Q5T8D3 534 aaPredicted RBP24.76■■□□□ 1.55
FOXA1-204ENST00000554607 LRRC31Q6UY01 552 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 GCNT7Q6ZNI0 430 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 Q6ZSR6 202 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 SLC26A9Q7LBE3 791 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 PASD1Q8IV76 773 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 DCAF4L2Q8NA75 395 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 ZNF397Q8NF99 534 aaPredicted RBP24.76■■□□□ 1.55
FOXA1-204ENST00000554607 NAF1Q96HR8 494 aaKnown RBP24.76■■□□□ 1.55
FOXA1-204ENST00000554607 TKTL2Q9H0I9 626 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 SYNCQ9H7C4 482 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 POLR1BQ9H9Y6 1135 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 ARHGEF38Q9NXL2 777 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 ZFR2Q9UPR6 939 aaKnown RBP24.76■■□□□ 1.55
FOXA1-204ENST00000554607 PAXBP1Q9Y5B6 917 aa24.76■■□□□ 1.55
FOXA1-204ENST00000554607 K7ERQ8 282 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 RIOK3O14730 519 aaKnown RBP24.75■■□□□ 1.55
FOXA1-204ENST00000554607 CSO75390 466 aaKnown RBP24.75■■□□□ 1.55
FOXA1-204ENST00000554607 RRM1P23921 792 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 PTK2Q05397 1052 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 ALFQ53S48 1182 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 GJB7Q6PEY0 223 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 ZDHHC17Q8IUH5 632 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 FEM1CQ96JP0 617 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 CRACR2AQ9BSW2 395 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 DNAJC28Q9NX36 388 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 NCKIPSDQ9NZQ3 722 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 APEX2Q9UBZ4 518 aa24.75■■□□□ 1.55
FOXA1-204ENST00000554607 K7ESM1 405 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 SMAD6O43541 496 aaKnown RBP24.74■■□□□ 1.55
FOXA1-204ENST00000554607 F9P00740 461 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 KRT9P35527 623 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 CXCR3P49682 368 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 RPS21P63220 83 aaKnown RBP24.74■■□□□ 1.55
FOXA1-204ENST00000554607 TMEM259Q4ZIN3 620 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 SEL1L3Q68CR1 1132 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 KIAA1161Q6NSJ0 714 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 GBP6Q6ZN66 633 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 PTAR1Q7Z6K3 402 aaPredicted RBP24.74■■□□□ 1.55
FOXA1-204ENST00000554607 SLC22A18ASQ8N1D0 253 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 CHST14Q8NCH0 376 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 C1orf131Q8NDD1 294 aaKnown RBP24.74■■□□□ 1.55
FOXA1-204ENST00000554607 MAPK15Q8TD08 544 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 SHC3Q92529 594 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 C1orf74Q96LT6 269 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 NPY6RQ99463 290 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 SLC17A9Q9BYT1 436 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 DPH1Q9BZG8 443 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 THSD1Q9NS62 852 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 PIGVQ9NUD9 493 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 STAP1Q9ULZ2 295 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 ASH1LQ9NR48 2969 aaKnown RBP24.74■■□□□ 1.55
FOXA1-204ENST00000554607 MGAQ8IWI9 3026 aa24.74■■□□□ 1.55
FOXA1-204ENST00000554607 DRGXA6NNA5 263 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 H3BM21 787 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 ADCY5O95622 1261 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 ERBB2P04626 1255 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 SLC9A1P19634 815 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 NEK3P51956 506 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 SLC20A2Q08357 652 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 RETSATQ6NUM9 610 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 C22orf39Q6P5X5 142 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 PCSK4Q6UW60 755 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 KYAT3Q6YP21 454 aaKnown RBP24.73■■□□□ 1.55
FOXA1-204ENST00000554607 ZSCAN30Q86W11 494 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 GRIN3AQ8TCU5 1115 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 KCNE4Q8WWG9 221 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 GRAMD1AQ96CP6 724 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 BMFQ96LC9 184 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 OSBPL2Q9H1P3 480 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.73■■□□□ 1.55
FOXA1-204ENST00000554607 CSNK1G3Q9Y6M4 447 aa24.73■■□□□ 1.55
FOXA1-204ENST00000554607 A0A0D9SEW6 157 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 LZTS3O60299 673 aaPredicted RBP24.72■■□□□ 1.55
FOXA1-204ENST00000554607 LEFTY1O75610 366 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 OR1E1P30953 314 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 MAPK8IP2Q13387 824 aaPredicted RBP24.72■■□□□ 1.55
FOXA1-204ENST00000554607 ZNF542PQ5EBM4 170 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 ZCCHC8Q6NZY4 707 aaKnown RBP24.72■■□□□ 1.55
FOXA1-204ENST00000554607 LINGO4Q6UY18 593 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 ZNF783Q6ZMS7 281 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 DPY19L3Q6ZPD9 716 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 ZNF683Q8IZ20 524 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 IFI44Q8TCB0 444 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 PGAP3Q96FM1 320 aaPredicted RBP24.72■■□□□ 1.55
FOXA1-204ENST00000554607 CEP44Q9C0F1 390 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 TNKS2Q9H2K2 1166 aa24.72■■□□□ 1.55
FOXA1-204ENST00000554607 GPR27Q9NS67 375 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms