RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DAPK3O43293 454 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 HNRNPRO43390 633 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 EDIL3O43854 480 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 DAB1O75553 588 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PTBP3O95758 552 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 KRT14P02533 472 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PDGFAP04085 211 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SPATA31C1P0DKV0 1188 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ARP10275 920 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ARAFP10398 606 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SRFP11831 508 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TDGF1P13385 188 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CHRM3P20309 590 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PTBP1P26599 531 aaKnown RBP eCLIP2.78□□□□□ -1.963e-11■■■■■ 42.1
PRPF39-206ENST00000554429 ALDH4A1P30038 563 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PHKA2P46019 1235 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CAMLGP49069 296 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 DNM2P50570 870 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 AFF1P51825 1210 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ADCY7P51828 1080 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 JAK3P52333 1124 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 METAP1P53582 386 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 RNASE9P60153 205 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 KCNJ10P78508 379 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 RBP5P82980 135 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PTH1RQ03431 593 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 DSC1Q08554 894 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8FQ08AF8 430 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8DPQ0D2H9 430 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 MAP4K2Q12851 820 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CSTF3Q12996 717 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PUM1Q14671 1186 aaKnown RBP eCLIP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 DHCR24Q15392 516 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PFKFB3Q16875 520 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 FBXO43Q4G163 708 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GLE1Q53GS7 698 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SNAP47Q5SQN1 464 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PDPK2PQ6A1A2 396 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TWF2Q6IBS0 349 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TXNDC11Q6PKC3 985 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF765Q7L2R6 523 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CYP2U1Q7Z449 544 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 BRAPQ7Z569 592 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SLFN11Q7Z7L1 901 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC60Q8IWA6 550 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ETFBKMTQ8IXQ9 262 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM145Q8NBT3 493 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PIGOQ8TEQ8 1089 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CACTINQ8WUQ7 758 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GTF3C6Q969F1 213 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CLDN23Q96B33 292 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SDCCAG3Q96C92 435 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 RHOVQ96L33 236 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PPP1R36Q96LQ0 422 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CAMK1GQ96NX5 476 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 KLHL5Q96PQ7 755 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 KCNC2Q96PR1 638 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 NACC1Q96RE7 527 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 JPH2Q9BR39 696 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 RSRP1Q9BUV0 290 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CNPPD1Q9BV87 410 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 VN1R3Q9BXE9 311 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TDRD1Q9BXT4 1180 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 IGFLR1Q9H665 355 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 HAUS4Q9H6D7 363 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SCPEP1Q9HB40 452 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 NRBP2Q9NSY0 501 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TAS2R3Q9NYW6 316 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ASH2LQ9UBL3 628 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 HMGXB4Q9UGU5 601 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 NDOR1Q9UHB4 597 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 AFF4Q9UHB7 1163 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 FKBPLQ9UIM3 349 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PSME2Q9UL46 239 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CFL2Q9Y281 166 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 RPH3AQ9Y2J0 694 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SPEF1Q9Y4P9 236 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHA10Q9Y5I2 948 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 HCFC2Q9Y5Z7 792 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TAF6LQ9Y6J9 622 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 DENND4CQ5VZ89 1909 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PLXND1Q9Y4D7 1925 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SLC9B1P1A6NJY1 282 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 USP27XA6NNY8 438 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 A8MV72 311 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 HIDE1A8MVS5 230 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 WDR64B1ANS9 1081 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PSMD9O00233 223 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PRODHO43272 600 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ATP5HO75947 161 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PLEKHA8P1O95397 391 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GSNP06396 782 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GALTP07902 379 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GCKP35557 465 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 RPS9P46781 194 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 GATMP50440 423 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 BCAR1P56945 870 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 DSG1Q02413 1049 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TAP2Q03519 686 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms