RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 BUB1BO60566 1050 aaPredicted RBP14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 HSF2BPO75031 334 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 RNASEH2AO75792 299 aaKnown RBP14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 IGLV3-27P01718 113 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 LTFP02788 710 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 CSKP41240 450 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 NOP2P46087 812 aaKnown RBP14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 CST6Q15828 149 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 NUGGCQ68CJ6 796 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 NCEH1Q6PIU2 408 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 NYAP1Q6ZVC0 841 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 USP30Q70CQ3 517 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 BEND5Q7L4P6 421 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 SLFN11Q7Z7L1 901 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 DEFB106AQ8N104 65 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 CARNMT1Q8N4J0 409 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 HJURPQ8NCD3 748 aaPredicted RBP14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 FNIP1Q8TF40 1166 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 RXFP2Q8WXD0 754 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 SKA1Q96BD8 255 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 MYO19Q96H55 970 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 CRELD1Q96HD1 420 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 PRICKLE1Q96MT3 831 aaPredicted RBP14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 ELF4Q99607 663 aaPredicted RBP14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 OMDQ99983 421 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 NEUROG2Q9H2A3 272 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 AASDHPPTQ9NRN7 309 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 SCML1Q9UN30 329 aa14.39□□□□□ -0.11
SPTLC2-202ENST00000554365 A0A1W2PPC4 97 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 LRRC72A6NJI9 287 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 CBX4O00257 560 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 ENC1O14682 589 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 FANCGO15287 622 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 ASLP04424 464 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 ITGAVP06756 1048 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 TFE3P19532 575 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 CLDN6P56747 220 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 RNASE9P60153 205 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 RPS24P62847 133 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 YWHAZP63104 245 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 PITX1P78337 314 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 SFSWAPQ12872 951 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 CDH18Q13634 790 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 CCDC14Q49A88 953 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 RAB6CQ53S08 254 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 SYPL2Q5VXT5 272 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 NADSYN1Q6IA69 706 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 C11orf63Q6NUN7 778 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 DCUN1D2Q6PH85 259 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 BNIPLQ7Z465 357 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 TMPRSS12Q86WS5 348 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 MMAAQ8IVH4 418 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 CCDC117Q8IWD4 279 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 CFAP52Q8N1V2 620 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 ARFGAP1Q8N6T3 406 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 NIPA2Q8N8Q9 360 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 FIBINQ8TAL6 211 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 NT5C3BQ969T7 300 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 TTC17Q96AE7 1141 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 FAM149B1Q96BN6 582 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 MYEOVQ96EZ4 313 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 LMLNQ96KR4 655 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 DDX50Q9BQ39 737 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 RAB6CQ9H0N0 254 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 GOLPH3Q9H4A6 298 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 EBF2Q9HAK2 575 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 POPDC2Q9HBU9 364 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 INTS6Q9UL03 887 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 NAALADL1Q9UQQ1 740 aa14.38□□□□□ -0.11
SPTLC2-202ENST00000554365 LOC400499M0QZD8 3231 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 SMG1Q96Q15 3661 aaKnown RBP14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 APC2O95996 2303 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 IGSF10Q6WRI0 2623 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 A0A087WV48 116 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 TTC34A8MYJ7 566 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 ESPNB1AK53 854 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 PALMO75781 387 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 PROSCO94903 275 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 LDOC1O95751 146 aaPredicted RBP14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 WNT1P04628 370 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 JUPP14923 745 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 GPD1P21695 349 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 CTSOP43234 321 aaPredicted RBP14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 PTPN9P43378 593 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 ABCG1P45844 678 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 ZNF143P52747 638 aaPredicted RBP14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 DNAJC3Q13217 504 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 MESDQ14696 234 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 FSCBQ5H9T9 825 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 EID2Q8N6I1 236 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 OR2T34Q8NGX1 318 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 PIP4K2CQ8TBX8 421 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 CNDP2Q96KP4 475 aaKnown RBP14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 CALR3Q96L12 384 aaKnown RBP14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 MRGPRX3Q96LB0 322 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 CFAP57Q96MR6 1250 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 NPY6RQ99463 290 aa14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPTLC2-202ENST00000554365 ERVW-1Q9UQF0 538 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms