RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CDC42EP1Q00587 391 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 GUCY1B3Q02153 619 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 APBA1Q02410 837 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 MGAT5Q09328 741 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 FCHO2Q0JRZ9 810 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 MAPK7Q13164 816 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TP53BP2Q13625 1128 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 BMS1Q14692 1282 aaKnown RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 NONOQ15233 471 aaKnown RBP eCLIP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PLK5Q496M5 336 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PDCD4Q53EL6 469 aaKnown RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 BMP2KLQ5H9B9 411 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 STPG1Q5TH74 334 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ANKS6Q68DC2 871 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 DRICH1Q6PGQ1 229 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 BLOC1S2Q6QNY1 142 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 SYNE3Q6ZMZ3 975 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ESPNLQ6ZVH7 1005 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 MTSS1LQ765P7 747 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 NEK8Q86SG6 692 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 LRRTM3Q86VH5 581 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 WDR5BQ86VZ2 330 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 LONP2Q86WA8 852 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 KIF18BQ86Y91 864 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 MFSD6LQ8IWD5 586 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 NXPE1Q8N323 547 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 CELF5Q8N6W0 485 aaKnown RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 C4orf32Q8N8J7 132 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 NECAB1Q8N987 351 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 FAM98AQ8NCA5 519 aaKnown RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 SIMC1Q8NDZ2 872 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 CNNM3Q8NE01 707 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 BEST2Q8NFU1 509 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 OR10H5Q8NGA6 315 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 OR10T2Q8NGX3 314 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF461Q8TAF7 563 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ASB10Q8WXI3 467 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 RSPH1Q8WYR4 309 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 DNASE1L2Q92874 299 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 P2RY11Q96G91 374 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 FAM20AQ96MK3 541 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PGLYRP2Q96PD5 576 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 GLT8D2Q9H1C3 349 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 CDT1Q9H211 546 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ZSWIM4Q9H7M6 989 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 BRD9Q9H8M2 597 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TRPV4Q9HBA0 871 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ZFP14Q9HCL3 533 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 UBN1Q9NPG3 1134 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 CD93Q9NPY3 652 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TRPV5Q9NQA5 729 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ANKEF1Q9NU02 776 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TMEM74BQ9NUR3 256 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TMLHEQ9NVH6 421 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TUBGCP4Q9UGJ1 667 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 SSX2IPQ9Y2D8 614 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 INSL5Q9Y5Q6 135 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ZFP37Q9Y6Q3 630 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 SF3B1O75533 1304 aaKnown RBP eCLIP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ANAPC1Q9H1A4 1944 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 MYOFQ9NZM1 2061 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ZMYM2Q9UBW7 1377 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 PCDH15Q96QU1 1955 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 PRSS38A1L453 326 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 MTMR11A4FU01 709 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 C4orf47A7E2U8 309 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 PP2D1A8MPX8 630 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF891A8MT65 544 aaPredicted RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 E9PMD0 336 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ACKR2O00590 384 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 PODXLO00592 558 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 NRP2O60462 931 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 DEXIO95424 95 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 EGR2P11161 476 aaPredicted RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 MYL4P12829 197 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 DDX6P26196 483 aaKnown RBP eCLIP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 CDC25AP30304 524 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 MAGEA9P43362 315 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 AARSP49588 968 aaKnown RBP eCLIP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 CCR3P51677 355 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ZBTB6Q15916 424 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ME3Q16798 604 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ERCC6LQ2NKX8 1250 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SOWAHCQ53LP3 525 aaPredicted RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 TMEM196Q5HYL7 178 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 LIN9Q5TKA1 542 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ABHD17BQ5VST6 288 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SDHAF4Q5VUM1 108 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SLC39A4Q6P5W5 647 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 RUFY3Q7L099 469 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 MARCH9Q86YJ5 346 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ARID3BQ8IVW6 561 aaPredicted RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 TCEAL8Q8IYN2 117 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SPEM1Q8N4L4 309 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ATAD1Q8NBU5 361 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 NSUN7Q8NE18 718 aaKnown RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 CCDC148Q8NFR7 591 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 OR2I1PQ8NGU4 316 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 CHTF18Q8WVB6 975 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 TCP11Q8WWU5 503 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms