RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 PCDHA10Q9Y5I2 948 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 COL24A1Q17RW2 1714 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 USP6P35125 1406 aa5.22□□□□□ -1.57
ATXN3-217ENST00000553287 ADCY9O60503 1353 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 SLC38A8A6NNN8 435 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 TBXAS1P24557 533 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-217ENST00000553287 CCKARP32238 428 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 POLD2P49005 469 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 ADPRHP54922 357 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 PPATQ06203 517 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 HDAC1Q13547 482 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-217ENST00000553287 TRIM60Q495X7 471 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 ERAP2Q6P179 960 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 LVRNQ6Q4G3 990 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 MDGA2Q7Z553 956 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 PELI3Q8N2H9 469 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 EID2BQ96D98 161 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 TMEM120AQ9BXJ8 343 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 IL21RQ9HBE5 538 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 SPAG4Q9NPE6 437 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 LIN7CQ9NUP9 197 aaKnown RBP5.21□□□□□ -1.58
ATXN3-217ENST00000553287 COPG1Q9Y678 874 aaKnown RBP5.21□□□□□ -1.58
ATXN3-217ENST00000553287 PPIP5K1Q6PFW1 1433 aa5.21□□□□□ -1.58
ATXN3-217ENST00000553287 WDR90Q96KV7 1748 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 EIF3AQ14152 1382 aaKnown RBP5.2□□□□□ -1.58
ATXN3-217ENST00000553287 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 CXorf65A6NEN9 183 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 AGAP5A6NIR3 686 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 EFCAB8A8MWE9 144 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 FOXO6A8MYZ6 492 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 MSI1O43347 362 aaKnown RBP5.2□□□□□ -1.58
ATXN3-217ENST00000553287 SKAP2O75563 359 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-217ENST00000553287 TNFAIP2Q03169 654 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 GALNT3Q14435 633 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 PUM3Q15397 648 aaKnown RBP5.2□□□□□ -1.58
ATXN3-217ENST00000553287 ZACNQ401N2 412 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 ASB5Q8WWX0 329 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 LYZL4Q96KX0 146 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 RTKNQ9BST9 563 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 WDR26Q9H7D7 661 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 HERC5Q9UII4 1024 aaKnown RBP5.2□□□□□ -1.58
ATXN3-217ENST00000553287 FBXO4Q9UKT5 387 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 TNS2Q63HR2 1409 aa5.2□□□□□ -1.58
ATXN3-217ENST00000553287 BRD4O60885 1362 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-217ENST00000553287 SLIT3O75094 1523 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 KCNJ18B7U540 433 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 MCIDASD6RGH6 385 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 ITGA2BP08514 1039 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 CDC25AP30304 524 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 CDKN2AP42771 156 aaKnown RBP5.19□□□□□ -1.58
ATXN3-217ENST00000553287 HTR3AP46098 478 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 PRELPP51888 382 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 POLE2P56282 527 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 P2RX3P56373 397 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 PMPCAQ10713 525 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 CCDC117Q8IWD4 279 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-217ENST00000553287 ATG16L2Q8NAA4 619 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 KATNAL1Q9BW62 490 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 TASP1Q9H6P5 420 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 DAPP1Q9UN19 280 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 DTX4Q9Y2E6 619 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 CPSF1Q10570 1443 aaKnown RBP5.19□□□□□ -1.58
ATXN3-217ENST00000553287 QSER1Q2KHR3 1735 aa5.19□□□□□ -1.58
ATXN3-217ENST00000553287 DOT1LQ8TEK3 1739 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 BCL9O00512 1426 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 ABHD14A-ACY1A0A1B0GW23 586 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 MBD3L5A6NJ08 208 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-217ENST00000553287 H0YGN5 161 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 NEURL1O76050 574 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 ACTL6BO94805 426 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 IFNA2P01563 188 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 LCKP06239 509 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 PDIA3P30101 505 aaKnown RBP5.18□□□□□ -1.58
ATXN3-217ENST00000553287 SERPINF1P36955 418 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 THBS3P49746 956 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 HTR6P50406 440 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 RCAN1P53805 252 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 GALNT1Q10472 559 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-217ENST00000553287 ODF3L2Q3SX64 289 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 TBRG1Q3YBR2 411 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 ARL13AQ5H913 290 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-217ENST00000553287 WASHC2DQ5SRD0 308 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 ASPHD1Q5U4P2 390 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 NFRKBQ6P4R8 1299 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 C1orf228Q6PIY5 440 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 TMEM200AQ86VY9 491 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 GPSM1Q86YR5 675 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 SCAMP5Q8TAC9 235 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 LPAR1Q92633 364 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 INPP5DQ92835 1189 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 MARK4Q96L34 752 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 CRB3Q9BUF7 120 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 TRPM1Q7Z4N2 1603 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 IGSF1Q8N6C5 1336 aa5.18□□□□□ -1.58
ATXN3-217ENST00000553287 N4BP2Q86UW6 1770 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-217ENST00000553287 FAM90A8PA6NJQ4 464 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 FAM90A13PP0C7W8 464 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 FAM90A24PP0C7X0 464 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 HOXB2P14652 356 aa5.17□□□□□ -1.58
ATXN3-217ENST00000553287 CHRNA5P30532 468 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms