RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
SNRPF-205ENST00000553192 PLK1P53350 603 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 AP3M2P53677 418 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 DLG2Q15700 870 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 ZNF394Q53GI3 561 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 RRAGBQ5VZM2 374 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 SV2AQ7L0J3 742 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 UNC45BQ8IWX7 931 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 NELFCDQ8IXH7 590 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 C12orf56Q8IXR9 622 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 IL22RA1Q8N6P7 574 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 GPBAR1Q8TDU6 330 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 APOBEC4Q8WW27 367 aaKnown RBP12.05□□□□□ -0.48
SNRPF-205ENST00000553192 TAF4BQ92750 862 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 ERCC4Q92889 916 aaPredicted RBP12.05□□□□□ -0.48
SNRPF-205ENST00000553192 TCTN2Q96GX1 697 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 POM121Q96HA1 1249 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 SLC45A3Q96JT2 553 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 FCRL2Q96LA5 508 aaPredicted RBP12.05□□□□□ -0.48
SNRPF-205ENST00000553192 TBATAQ96M53 351 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 SEMA6CQ9H3T2 930 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 CASS4Q9NQ75 786 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 PRDM8Q9NQV8 689 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 XPO7Q9UIA9 1087 aaKnown RBP12.05□□□□□ -0.48
SNRPF-205ENST00000553192 RNF215Q9Y6U7 377 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 ESPL1Q14674 2120 aa12.05□□□□□ -0.48
SNRPF-205ENST00000553192 CNTN5O94779 1100 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 LDLRP01130 860 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 PDGFRAP16234 1089 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 ZNF18P17022 549 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 TRIM21P19474 475 aaKnown RBP12.04□□□□□ -0.48
SNRPF-205ENST00000553192 TBX4P57082 545 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 CDC20Q12834 499 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 DEFB109BQ30KR1 87 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 ACCSLQ4AC99 568 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 STXBP4Q6ZWJ1 553 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 CCDC65Q8IXS2 484 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 ANKRD52Q8NB46 1076 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 PCDH19Q8TAB3 1148 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 TATDN2Q93075 761 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 ALG14Q96F25 216 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 HEXIM2Q96MH2 286 aaKnown RBP12.04□□□□□ -0.48
SNRPF-205ENST00000553192 SRRTQ9BXP5 876 aaKnown RBP12.04□□□□□ -0.48
SNRPF-205ENST00000553192 CYP3A43Q9HB55 503 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 ABCC13Q9NSE7 274 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 PCDHGA3Q9Y5H0 932 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 PCNX1Q96RV3 2341 aa12.04□□□□□ -0.48
SNRPF-205ENST00000553192 CSMD2Q7Z408 3487 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 TYW5A2RUC4 315 aaKnown RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 KPNA3O00505 521 aaPredicted RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 BNIP3LO60238 219 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 EXOC3O60645 756 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 GABBR2O75899 941 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 HLA-DRAP01903 254 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 SULT2A1Q06520 285 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 ADIGQ0VDE8 80 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 EIF2S3LQ2VIR3 472 aaKnown RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 EFHC2Q5JST6 749 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 C1orf220Q5T0J3 134 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 ATP1A1-AS1Q5TC04 95 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 TMEM164Q5U3C3 297 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 ARHGAP17Q68EM7 881 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 TCTN3Q6NUS6 607 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 ERN2Q76MJ5 926 aaKnown RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 CCNJLQ8IV13 435 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 CCDC117Q8IWD4 279 aaPredicted RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 CACNA2D3Q8IZS8 1091 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 EFCAB3Q8N7B9 438 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 Q8N9G6 341 aaPredicted RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 SLC4A11Q8NBS3 891 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 OR52K2Q8NGK3 314 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 CPT1CQ8TCG5 803 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 MOCOSQ96EN8 888 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 ERRFI1Q9UJM3 462 aaPredicted RBP12.03□□□□□ -0.48
SNRPF-205ENST00000553192 AKAP9Q99996 3911 aa12.03□□□□□ -0.48
SNRPF-205ENST00000553192 UNC13CQ8NB66 2214 aa12.02□□□□□ -0.48
SNRPF-205ENST00000553192 TTLL8A6PVC2 850 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 EFCAB7A8K855 629 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 FPGTO14772 594 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 PDGFAP04085 211 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 FGF3P11487 239 aaPredicted RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 CHRNA3P32297 505 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 RECQLP46063 649 aaPredicted RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 DAOAP59103 153 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 SNRPFP62306 86 aaKnown RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 SLC12A1Q13621 1099 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 ARHGAP44Q17R89 818 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 CXorf57Q6NSI4 855 aaKnown RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 CIR1Q86X95 450 aaPredicted RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 LGI2Q8N0V4 545 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 SH2D3CQ8N5H7 860 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 CHST14Q8NCH0 376 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 OR2A12Q8NGT7 310 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 PDCD6IPQ8WUM4 868 aaKnown RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 SLC39A13Q96H72 371 aa12.02□□□□□ -0.49
SNRPF-205ENST00000553192 LENG8Q96PV6 779 aaPredicted RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 DDX50Q9BQ39 737 aaKnown RBP12.02□□□□□ -0.49
SNRPF-205ENST00000553192 HDAC8Q9BY41 377 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms