RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MT-CO1P00395 513 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 MT-CO3P00414 261 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 CTSLP07711 333 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 THEGLP0DJG4 465 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 GIMD1P0DJR0 217 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 CKMT1AP12532 417 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 SRCP12931 536 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 ACTN2P35609 894 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 POLR2FP61218 127 aaKnown RBP12.13□□□□□ -0.47
CKAP4-202ENST00000552828 CCDC15Q0P6D6 951 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 TBC1D25Q3MII6 688 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 POM121L1PQ3SYA9 428 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 CDCP2Q5VXM1 449 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 OLFML1Q6UWY5 402 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 C14orf80Q86SX3 495 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 HORMAD1Q86X24 394 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 ERICH1Q86X53 443 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF683Q8IZ20 524 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 ZNF397Q8NF99 534 aaPredicted RBP12.13□□□□□ -0.47
CKAP4-202ENST00000552828 OR2A12Q8NGT7 310 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 IFT43Q96FT9 208 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 PSMB7Q99436 277 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 HDAC8Q9BY41 377 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 GANQ9H2C0 597 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 CA5BQ9Y2D0 317 aa12.13□□□□□ -0.47
CKAP4-202ENST00000552828 ATMQ13315 3056 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 TENM4Q6N022 2769 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 SYNJ2BP-COX16A0A087WUM0 186 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 A0A1W2PQU0 124 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 DRGXA6NNA5 263 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 TEX33O43247 280 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 DAB1O75553 588 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 GRAP2O75791 330 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 CNTN5O94779 1100 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 CHRNA3P32297 505 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 NOS2P35228 1153 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 CLCN1P35523 988 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 CXCR3P49682 368 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 CLCN6P51797 869 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 KRT83P78385 493 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 FANCCQ00597 558 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 SLC6A3Q01959 620 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 TLE3Q04726 772 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 NR1I3Q14994 352 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 OTUD1Q5VV17 481 aaPredicted RBP12.12□□□□□ -0.47
CKAP4-202ENST00000552828 FAM183BPQ6ZVS7 135 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 ABI3BPQ7Z7G0 1075 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 FAM174AQ8TBP5 190 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 NT5C3BQ969T7 300 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 PGAP3Q96FM1 320 aaPredicted RBP12.12□□□□□ -0.47
CKAP4-202ENST00000552828 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
CKAP4-202ENST00000552828 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
CKAP4-202ENST00000552828 NOX5Q96PH1 765 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 C2orf49Q9BVC5 232 aaPredicted RBP12.12□□□□□ -0.47
CKAP4-202ENST00000552828 NLRC4Q9NPP4 1024 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 GPR27Q9NS67 375 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 PIGVQ9NUD9 493 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 TMEM51Q9NW97 253 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 UCKL1Q9NWZ5 548 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 ARHGEF38Q9NXL2 777 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 RRN3Q9NYV6 651 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 COX16Q9P0S2 106 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 VPS51Q9UID3 782 aa12.12□□□□□ -0.47
CKAP4-202ENST00000552828 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
CKAP4-202ENST00000552828 TP53BP1Q12888 1972 aaPredicted RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 TEX51A0A1B0GUA7 166 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 A0A1W2PQC6 194 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 F8VZ95 297 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 I6L893 689 aaPredicted RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 K7ERQ8 282 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 M0QYT0 321 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 SLC31A1O15431 190 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 SMAD6O43541 496 aaKnown RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 LZTS3O60299 673 aaPredicted RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 PIAS2O75928 621 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 DXOO77932 396 aaKnown RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ADCY5O95622 1261 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 PRNPP04156 253 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 PRB1P04280 392 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ERBB2P04626 1255 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 GP1BAP07359 652 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 PNMA6AP0CW24 399 aaPredicted RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 PRLRP16471 622 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 HNRNPA2B1P22626 353 aaKnown RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 AKT2P31751 481 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 KRT9P35527 623 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 STAT1P42224 750 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 UBASH3AP57075 661 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 SNX16P57768 344 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 NME3Q13232 169 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ALFQ53S48 1182 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 BRMS1LQ5PSV4 323 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ARTNQ5T4W7 220 aa12.11□□□□□ -0.47
CKAP4-202ENST00000552828 ACBD5Q5T8D3 534 aaPredicted RBP12.11□□□□□ -0.47
CKAP4-202ENST00000552828 GPR155Q7Z3F1 870 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms