RNA–Protein interactions for RNA: ENST00000552211.5

NCKAP1L-208, Transcript of NCK associated protein 1 like, human

TSL 5

Gene NCKAP1L, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCKAP1L-208	ENST00000552211	ZNF606	Q8WXB4	792 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SKA1	Q96BD8	255 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	ZNF578	Q96N58	590 aa	Predicted RBP	10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC2A13	Q96QE2	648 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	KLF6	Q99612	283 aa	Predicted RBP	10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	GTPBP4	Q9BZE4	634 aa	Known RBP	10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	INTS2	Q9H0H0	1204 aa	Known RBP	10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	FAM204A	Q9H8W3	233 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	POLR1B	Q9H9Y6	1135 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	METTL14	Q9HCE5	456 aa	Known RBP	10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PIGV	Q9NUD9	493 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	DDIT4	Q9NX09	232 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	VPS28	Q9UK41	221 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CNTN6	Q9UQ52	1028 aa		10.36	□□□□□ -0.75
NCKAP1L-208	ENST00000552211		A0A1W2PQ27	194 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211		A0A1W2PQ64	194 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	TYW5	A2RUC4	315 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PPP1R3G	B7ZBB8	358 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211		B8ZZF3	427 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CAPN9	O14815	690 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	MUSK	O15146	869 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	THAP12	O43422	761 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	STX10	O60499	249 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	LEFTY1	O75610	366 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PCDH8	O95206	1070 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PAK4	O96013	591 aa	Predicted RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	ZNF18	P17022	549 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	YWHAE	P62258	255 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	YWHAZ	P63104	245 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	KRT85	P78386	507 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	FKBP3	Q00688	224 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	VAC14	Q08AM6	782 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PTPN20	Q4JDL3	420 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC45A4	Q5BKX6	768 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PARS2	Q7L3T8	475 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	OXR1	Q8N573	874 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	LSM14A	Q8ND56	463 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	EHBP1	Q8NDI1	1231 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SPATA20	Q8TB22	786 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	MAPK15	Q8TD08	544 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PPP1R13B	Q96KQ4	1090 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	MED15	Q96RN5	788 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	DDX50	Q9BQ39	737 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CRACR2A	Q9BSW2	395 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	IRX2	Q9BZI1	471 aa	Predicted RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CLPB	Q9H078	707 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	POPDC2	Q9HBU9	364 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	PREB	Q9HCU5	417 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	NDFIP2	Q9NV92	336 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	NLGN3	Q9NZ94	848 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	ZNF212	Q9UDV6	495 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC25A13	Q9UJS0	675 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	MAN1B1	Q9UKM7	699 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	KIAA1257	Q9ULG3	409 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	DMTF1	Q9Y222	760 aa		10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	FCF1	Q9Y324	198 aa	Known RBP	10.35	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	NBAS	A2RRP1	2371 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CDRT15L2	A8MXV6	281 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC7A4	O43246	635 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC28A2	O43868	658 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	ZMPSTE24	O75844	475 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	C6	P13671	934 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC9A1	P19634	815 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	HNRNPA2B1	P22626	353 aa	Known RBP	10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	E2F1	Q01094	437 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CCDC40	Q4G0X9	1142 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	C22orf39	Q6P5X5	142 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	OLFML1	Q6UWY5	402 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	HSCB	Q8IWL3	235 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC35F3	Q8IY50	421 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	ATP6V0D2	Q8N8Y2	350 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	ATP11C	Q8NB49	1132 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	C1orf131	Q8NDD1	294 aa	Known RBP	10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CCDC47	Q96A33	483 aa	Known RBP	10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	SLC46A1	Q96NT5	459 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	DEPDC7	Q96QD5	511 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	DNAI2	Q9GZS0	605 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	MUC3B	Q9H195	1237 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	KDM4C	Q9H3R0	1056 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	CTNND2	Q9UQB3	1225 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	HS3ST2	Q9Y278	367 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	TBC1D30	Q9Y2I9	924 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	FADS3	Q9Y5Q0	445 aa		10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	UBR5	O95071	2799 aa	Predicted RBP	10.34	□□□□□ -0.75
NCKAP1L-208	ENST00000552211	FLNC	Q14315	2725 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	IGLON5	A6NGN9	336 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	C1QTNF3-AMACR	E9PGA6	284 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211		K7ENP7	123 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	BIN1	O00499	593 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	ARHGAP6	O43182	974 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	NOBOX	O60393	691 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	HSP90AA1	P07900	732 aa	Known RBP	10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	CDK4	P11802	303 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	NME1	P15531	152 aa	Known RBP	10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	GNA15	P30679	374 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	IGFALS	P35858	605 aa		10.33	□□□□□ -0.76
NCKAP1L-208	ENST00000552211	ACVRL1	P37023	503 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms