RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LY6G6EA0A0G2JKS1 128 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 BICDL2A1A5D9 508 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 LZTS3O60299 673 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 GRAP2O75791 330 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 MT-CO1P00395 513 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 MYF5P13349 255 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 C6P13671 934 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 RPS21P63220 83 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 ISXQ2M1V0 245 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 C5orf22Q49AR2 442 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 TMEM259Q4ZIN3 620 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 ZNF542PQ5EBM4 170 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 C3orf38Q5JPI3 329 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 SEL1L3Q68CR1 1132 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 KIAA1161Q6NSJ0 714 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 KYAT3Q6YP21 454 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 ZSCAN30Q86W11 494 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 PARGQ86W56 976 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 TRIM59Q8IWR1 403 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 ZNF548Q8NEK5 533 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 TPCN2Q8NHX9 752 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 GRIN3AQ8TCU5 1115 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 SNRNP27Q8WVK2 155 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 PPP1R13BQ96KQ4 1090 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 SLC17A9Q9BYT1 436 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 SIK2Q9H0K1 926 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 IPO11Q9UI26 975 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 VPS51Q9UID3 782 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 SATB2Q9UPW6 733 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 U3KQA8 63 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 NAV2Q8IVL1 2488 aa14.51□□□□□ -0.09
CHMP1A-210ENST00000551981 CPED1A4D0V7 1026 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 B8ZZF3 427 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 K7ERQ8 282 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 SNAP91O60641 907 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 NEBLO76041 1014 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 CSF2P04141 144 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 NME1P15531 152 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 RRM1P23921 792 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 GGCXP38435 758 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 USP8P40818 1118 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 RABIFP47224 123 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 NEK3P51956 506 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 MAPK8IP2Q13387 824 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 LY6DQ14210 128 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 CDKN3Q16667 212 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 ARSIQ5FYB1 569 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 OR6B2Q6IFH4 312 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 KLHL10Q6JEL2 608 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 TTI2Q6NXR4 508 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 C22orf39Q6P5X5 142 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 FOXR2Q6PJQ5 311 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 RBM44Q6ZP01 1051 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 C11orf57Q6ZUT1 292 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 C14orf80Q86SX3 495 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 SETD3Q86TU7 594 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 DCAF4L2Q8NA75 395 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 CHST14Q8NCH0 376 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 NELFBQ8WX92 580 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 FEM1CQ96JP0 617 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 CPXM1Q96SM3 734 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 SRRTQ9BXP5 876 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 SYNCQ9H7C4 482 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 GPR27Q9NS67 375 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 ZFR2Q9UPR6 939 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 PAXBP1Q9Y5B6 917 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 CSNK1G3Q9Y6M4 447 aa14.5□□□□□ -0.09
CHMP1A-210ENST00000551981 HECTD1Q9ULT8 2610 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 SPTY2D1-AS1A0A0U1RR47 76 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 M0QYT0 321 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 SMAD6O43541 496 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 DAB1O75553 588 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 LEFTY1O75610 366 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 TCEA3O75764 348 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 CNTN5O94779 1100 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 TGM2P21980 687 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 NOS2P35228 1153 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 FZD2Q14332 565 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 ACBD5Q5T8D3 534 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 ISM2Q6H9L7 571 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 LRRC31Q6UY01 552 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 FAM183BPQ6ZVS7 135 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 EFL1Q7Z2Z2 1120 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 ARL14Q8N4G2 192 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 TTC9Q92623 222 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 GLMNQ92990 594 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 MED8Q96G25 268 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 ATXN7L3BQ96GX2 97 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 TIGD1Q96MW7 591 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 SLC46A1Q96NT5 459 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 PSMB7Q99436 277 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 TNKS2Q9H2K2 1166 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 CLMPQ9H6B4 373 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 WDCPQ9H6R7 721 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 ACP6Q9NPH0 428 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 RRN3Q9NYV6 651 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 SALL4Q9UJQ4 1053 aa14.49□□□□□ -0.09
CHMP1A-210ENST00000551981 PCDHGA8Q9Y5G5 932 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms