RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 DUSP3P51452 185 aaPredicted RBP22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 VAC14Q08AM6 782 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 FZD2Q14332 565 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 ARSIQ5FYB1 569 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 EFHC1Q5JVL4 640 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 MAPK15Q8TD08 544 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 PRR11Q96HE9 360 aaPredicted RBP22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 HDAC8Q9BY41 377 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 USP29Q9HBJ7 922 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 KLF15Q9UIH9 416 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 SATB2Q9UPW6 733 aa22.15■■□□□ 1.14
SMARCD1-212ENST00000551966 BECN2A8MW95 431 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 PPP1R3GB7ZBB8 358 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 B8ZZF3 427 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 RAD51BO15315 384 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 ZNF821O75541 412 aaPredicted RBP22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 PAK4O96013 591 aaPredicted RBP22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 CSF2P04141 144 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 BMP6P22004 513 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 KRT83P78385 493 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 CCDC15Q0P6D6 951 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 OTUD1Q5VV17 481 aaPredicted RBP22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 GJB7Q6PEY0 223 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 IGF2-ASQ6U949 168 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 LINGO4Q6UY18 593 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 ZNF683Q8IZ20 524 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 PPP1R13BQ96KQ4 1090 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 SLC46A1Q96NT5 459 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 DUSP23Q9BVJ7 150 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 SLC17A9Q9BYT1 436 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 TNKS2Q9H2K2 1166 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 MAN1B1Q9UKM7 699 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 ATP6V1DQ9Y5K8 247 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 SNX10Q9Y5X0 201 aa22.14■■□□□ 1.13
SMARCD1-212ENST00000551966 A0A0D9SEW6 157 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 A6NNZ2 444 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 PYCARD-AS1I3L0S3 204 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 HSF2BPO75031 334 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 ADCY5O95622 1261 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 PRNPP04156 253 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 HNRNPKP61978 463 aaKnown RBP eCLIP22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 SKOR1P84550 965 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 STIM1Q13586 685 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 CDKN3Q16667 212 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 ARTNQ5T4W7 220 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 KLHL10Q6JEL2 608 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 DPY19L3Q6ZPD9 716 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 FAM183BPQ6ZVS7 135 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 DCP2Q8IU60 420 aaKnown RBP22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 ZNF548Q8NEK5 533 aaPredicted RBP22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 FAM174AQ8TBP5 190 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 ATXN7L3BQ96GX2 97 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 C2orf49Q9BVC5 232 aaPredicted RBP22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 DYRK4Q9NR20 520 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 THSD1Q9NS62 852 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 ENTPD2Q9Y5L3 495 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 WASF2Q9Y6W5 498 aa22.13■■□□□ 1.13
SMARCD1-212ENST00000551966 SPTY2D1-AS1A0A0U1RR47 76 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 PMS2P1A4D2B8 440 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 M0QYT0 321 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 CASC3O15234 703 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 LEFTY1O75610 366 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 AFPP02771 609 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 RHOCP08134 193 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 C6P13671 934 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 TFE3P19532 575 aaPredicted RBP22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 MAPK8IP2Q13387 824 aaPredicted RBP22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 C3orf38Q5JPI3 329 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 TPRG1LQ5T0D9 272 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 GUSBP11Q6P575 273 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 OLFML1Q6UWY5 402 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 PTAR1Q7Z6K3 402 aaPredicted RBP22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 GRIN3AQ8TCU5 1115 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 NELFBQ8WX92 580 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 CCDC114Q96M63 670 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 PIGVQ9NUD9 493 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 IL36AQ9UHA7 158 aa22.12■■□□□ 1.13
SMARCD1-212ENST00000551966 CPED1A4D0V7 1026 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 DRGXA6NNA5 263 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 ENDOD1O94919 500 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 ERBB2P04626 1255 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 KRT10P13645 584 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 NME1P15531 152 aaKnown RBP22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 NOS2P35228 1153 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 MARSP56192 900 aaKnown RBP22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 APBA1Q02410 837 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 MTA1Q13330 715 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 ZCCHC8Q6NZY4 707 aaKnown RBP22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 C22orf39Q6P5X5 142 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 KYAT3Q6YP21 454 aaKnown RBP22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 C11orf57Q6ZUT1 292 aaPredicted RBP22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 PASD1Q8IV76 773 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 KLF6Q99612 283 aaPredicted RBP22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 TKTL2Q9H0I9 626 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 TMPRSS4Q9NRS4 437 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 ARHGEF38Q9NXL2 777 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 MPP6Q9NZW5 540 aa22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.11■■□□□ 1.13
SMARCD1-212ENST00000551966 FADS3Q9Y5Q0 445 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms