RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 ARHGEF38Q9NXL2 777 aa15.15■□□□□ 0.02
TMEM106C-216ENST00000551305 MPP6Q9NZW5 540 aa15.15■□□□□ 0.02
TMEM106C-216ENST00000551305 U3KQA8 63 aa15.15■□□□□ 0.02
TMEM106C-216ENST00000551305 TDRD6O60522 2096 aaKnown RBP15.15■□□□□ 0.02
TMEM106C-216ENST00000551305 LEFTY1O75610 366 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 PNMA6AP0CW24 399 aaPredicted RBP15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 DPY19L3Q6ZPD9 716 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 SLC26A9Q7LBE3 791 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 ABI3BPQ7Z7G0 1075 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 OR7D4Q8NG98 312 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 SHC3Q92529 594 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 NPY6RQ99463 290 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 C2orf49Q9BVC5 232 aaPredicted RBP15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 DNAJC28Q9NX36 388 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 APEX2Q9UBZ4 518 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 IL36AQ9UHA7 158 aa15.14■□□□□ 0.01
TMEM106C-216ENST00000551305 TEX51A0A1B0GUA7 166 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 POM121BA6NF01 834 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 DRGXA6NNA5 263 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 K7ESM1 405 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 RAD51BO15315 384 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 GADD45BO75293 160 aaPredicted RBP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 USP12O75317 370 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 CSO75390 466 aaKnown RBP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 ZNF821O75541 412 aaPredicted RBP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 PAK4O96013 591 aaPredicted RBP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 PRNPP04156 253 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 PLA2G2AP14555 144 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 PON1P27169 355 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 CLCN1P35523 988 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 CXCR3P49682 368 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 SULT1E1P49888 294 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 GABREP78334 506 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 CCDC15Q0P6D6 951 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 MTA1Q13330 715 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 TMEM259Q4ZIN3 620 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 ARTNQ5T4W7 220 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 C22orf39Q6P5X5 142 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 GBP6Q6ZN66 633 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 PTAR1Q7Z6K3 402 aaPredicted RBP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 LSM14AQ8ND56 463 aaKnown RBP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 ZNF397Q8NF99 534 aaPredicted RBP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 CCDC114Q96M63 670 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 SPON2Q9BUD6 331 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 HDAC8Q9BY41 377 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 SYNCQ9H7C4 482 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 CPNE5Q9HCH3 593 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 NLGN3Q9NZ94 848 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 PTPRQQ9UMZ3 2332 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 ACTL7AQ9Y615 435 aa15.13■□□□□ 0.01
TMEM106C-216ENST00000551305 FOXN3O00409 490 aaPredicted RBP15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 SCAMP1O15126 338 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 SRGAP2O75044 1071 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 FGFR1OPO95684 399 aaKnown RBP15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 ALPPL2P10696 532 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 KRT9P35527 623 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 PTK2Q05397 1052 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 DEUP1Q05D60 604 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 FZD2Q14332 565 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 EXOC3L4Q17RC7 722 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 BRMS1LQ5PSV4 323 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 ZNF605Q86T29 641 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 SETD3Q86TU7 594 aaPredicted RBP15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 DCAF4L2Q8NA75 395 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 ZNF248Q8NDW4 579 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 HIC2Q96JB3 615 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 FAM81BQ96LP2 452 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 ZNF578Q96N58 590 aaPredicted RBP15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 DEPDC7Q96QD5 511 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 TBCBQ99426 244 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 SLC17A9Q9BYT1 436 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 ABCG4Q9H172 646 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 SIX2Q9NPC8 291 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 KLF15Q9UIH9 416 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 DNAJC12Q9UKB3 198 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 WASF2Q9Y6W5 498 aa15.12■□□□□ 0.01
TMEM106C-216ENST00000551305 NEMP2A6NFY4 417 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 A6NNZ2 444 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 OR1E1P30953 314 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 RECQLP46063 649 aaPredicted RBP15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 DNA2P51530 1060 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 CLCN6P51797 869 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 PCBP4P57723 403 aaKnown RBP15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 CFHR1Q03591 330 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 CDKN3Q16667 212 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 TPRG1LQ5T0D9 272 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 ARHGAP40Q5TG30 622 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 LRRC31Q6UY01 552 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 IRF2BP1Q8IU81 584 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 IFI44Q8TCB0 444 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 MAPK15Q8TD08 544 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 FADS3Q9Y5Q0 445 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 HS3ST3A1Q9Y663 406 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 A0A1W2PNU3 283 aaPredicted RBP15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 SPINT1O43278 529 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 ZMPSTE24O75844 475 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 GP1BAP07359 652 aa15.11■□□□□ 0.01
TMEM106C-216ENST00000551305 ADRB3P13945 408 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms