RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 FGF18O76093 207 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 CSPG5O95196 566 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 RPLP2P05387 115 aaKnown RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 RB1P06400 928 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 RPA1P27694 616 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 CXCR5P32302 372 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 SLC11A1P49279 550 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 HMGN5P82970 282 aaKnown RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 ORC2Q13416 577 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 PKP1Q13835 747 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 BTG3Q14201 252 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 LONRF3Q496Y0 759 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 KHDC1Q4VXA5 237 aaKnown RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 SLC39A4Q6P5W5 647 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 CPLX2Q6PUV4 134 aaKnown RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 RHPN2Q8IUC4 686 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 SMRP1Q8NCR6 262 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 TMIEQ8NEW7 156 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 POF1BQ8WVV4 589 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 PABPC5Q96DU9 382 aaKnown RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 CPB2Q96IY4 423 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 CEP170P1Q96L14 293 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 NLRP4Q96MN2 994 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 NFKBIZQ9BYH8 718 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 FGFBP2Q9BYJ0 223 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 POLR3FQ9H1D9 316 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 S1PR5Q9H228 398 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 FZD8Q9H461 694 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 PRDM13Q9H4Q3 707 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 PDZD7Q9H5P4 517 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 PTPRHQ9HD43 1115 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 TUFT1Q9NNX1 390 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 C1orf112Q9NSG2 853 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 ANKEF1Q9NU02 776 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 BARX2Q9UMQ3 279 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 SPEF1Q9Y4P9 236 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 ZNF638Q14966 1978 aaKnown RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 TRGV11A0A075B6L2 103 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 NT5C1B-RDH14C9J2C7 533 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 MBTPS2O43462 519 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 N4BP1O75113 896 aaKnown RBP5.32□□□□□ -1.56
SCAF11-214ENST00000550893 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
SCAF11-214ENST00000550893 MALP21145 153 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 KCNA5P22460 613 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 PRPHP41219 470 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 TECP42680 631 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 TRAPPC10P48553 1259 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 SLC12A3P55017 1021 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 MRPS5P82675 430 aaKnown RBP5.32□□□□□ -1.56
SCAF11-214ENST00000550893 POU5F1BQ06416 359 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 PTPN14Q15678 1187 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 PTPROQ16827 1216 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 DUSP6Q16828 381 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 FAM187BQ17R55 369 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 ERCC6LQ2NKX8 1250 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 XKR9Q5GH70 373 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 SP5Q6BEB4 398 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-214ENST00000550893 DPY19L2P1Q6NXN4 242 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 C1orf186Q6ZWK4 172 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 TTC7BQ86TV6 843 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 PRIMA1Q86XR5 153 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 LRRC43Q8N309 656 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 MIER2Q8N344 545 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 LNX2Q8N448 690 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 RNF149Q8NC42 400 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 SIMC1Q8NDZ2 872 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 SLC22A17Q8WUG5 538 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 WASF1Q92558 559 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 SLC9A6Q92581 669 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 ZSCAN31Q96LW9 406 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-214ENST00000550893 MAP7D2Q96T17 732 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 IMPG2Q9BZV3 1241 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 LMAN2LQ9H0V9 348 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 EPHX3Q9H6B9 360 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 KCTD5Q9NXV2 234 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 CTTNBP2NLQ9P2B4 639 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 FBXO2Q9UK22 296 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-214ENST00000550893 PCDHA12Q9UN75 941 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 MTMR6Q9Y217 621 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 PIN4Q9Y237 131 aaKnown RBP5.32□□□□□ -1.56
SCAF11-214ENST00000550893 PCDHB2Q9Y5E7 798 aa5.32□□□□□ -1.56
SCAF11-214ENST00000550893 TICRRQ7Z2Z1 1910 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 A0A1B0GUA9 196 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 A0A1W2PS29 197 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 LRRC14BA6NHZ5 514 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 TISP43B9A030 160 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 F2RL2O00254 374 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 PER2O15055 1255 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 ADAM12O43184 909 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 VNN2O95498 520 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 GALTP07902 379 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 CYP11B2P19099 503 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 MLH1P40692 756 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 PTH2RP49190 550 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 POLGP54098 1239 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 ZNF844Q08AG5 666 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 COASYQ13057 564 aa5.31□□□□□ -1.56
SCAF11-214ENST00000550893 ZNF169Q14929 603 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-214ENST00000550893 XKR4Q5GH76 650 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms