RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CLCA2Q9UQC9 943 aa22.18■■□□□ 1.14
SMARCC2-210ENST00000550519 ILVBLA1L0T0 632 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 ZNF821O75541 412 aaPredicted RBP22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 GIMD1P0DJR0 217 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 CYP11B1P15538 503 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 GLDCP23378 1020 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 OR1E1P30953 314 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 UBE2HP62256 183 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 E2F1Q01094 437 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 DRAP1Q14919 205 aaPredicted RBP22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 TMEM259Q4ZIN3 620 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 ARSIQ5FYB1 569 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 MIIPQ5JXC2 388 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 FAM102AQ5T9C2 384 aaPredicted RBP22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 DPY19L3Q6ZPD9 716 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 BNIPLQ7Z465 357 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 OR13H1Q8NG92 308 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 OR7D4Q8NG98 312 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 PDCL3Q9H2J4 239 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 TNKS2Q9H2K2 1166 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 FZD3Q9NPG1 666 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 IL36AQ9UHA7 158 aa22.17■■□□□ 1.14
SMARCC2-210ENST00000550519 LEFTY1O75610 366 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 ZMPSTE24O75844 475 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 FLT3P36888 993 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 TPD52L1Q16890 204 aaPredicted RBP22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 VWA3BQ502W6 1294 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 SEL1L3Q68CR1 1132 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 TRNP1Q6NT89 227 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 ZNF783Q6ZMS7 281 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 GCNT7Q6ZNI0 430 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 ABI3BPQ7Z7G0 1075 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 ERICH1Q86X53 443 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 SNIP1Q8TAD8 396 aaKnown RBP22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 GRIN3AQ8TCU5 1115 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 IFT43Q96FT9 208 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 PPP1R16AQ96I34 528 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 HAPLN3Q96S86 360 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 CALN1Q9BXU9 219 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 WASF2Q9Y6W5 498 aa22.16■■□□□ 1.14
SMARCC2-210ENST00000550519 PIAS2O75928 621 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 PCDH8O95206 1070 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 RECQLP46063 649 aaPredicted RBP22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 CLDN2P57739 230 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 SLC20A2Q08357 652 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 RETSATQ6NUM9 610 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 LRRC69Q6ZNQ3 347 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 FAM114A1Q8IWE2 563 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 SLC22A18ASQ8N1D0 253 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 FAM174AQ8TBP5 190 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 TUBGCP2Q9BSJ2 902 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 CEP44Q9C0F1 390 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 PRORYQ9H606 182 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 TMEM59LQ9UK28 342 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 FHOD1Q9Y613 1164 aa22.15■■□□□ 1.14
SMARCC2-210ENST00000550519 RRP8O43159 456 aaKnown RBP22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 SRGAP2O75044 1071 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 ENDOD1O94919 500 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 MT-CO3P00414 261 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 SERPINH1P50454 418 aaKnown RBP22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 NEK3P51956 506 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 DAB2P98082 770 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 RAPGEF1Q13905 1077 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 HS1BP3Q53T59 392 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 C2CD6Q53TS8 623 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 KLHDC7AQ5VTJ3 777 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 ARCQ7LC44 396 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 PCDH20Q8N6Y1 951 aaKnown RBP22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 FGF11Q92914 225 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 BMFQ96LC9 184 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 UBL7Q96S82 380 aaPredicted RBP22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 SPON2Q9BUD6 331 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 NAA15Q9BXJ9 866 aaKnown RBP22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 CAAP1Q9H8G2 361 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 GPR27Q9NS67 375 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 HS3ST3A1Q9Y663 406 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 PTPRQQ9UMZ3 2332 aa22.14■■□□□ 1.13
SMARCC2-210ENST00000550519 EIF4E1BA6NMX2 242 aaKnown RBP22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 FFAR2O15552 330 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 BRINP1O60477 761 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 LSM8O95777 96 aaKnown RBP22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 CKMT1AP12532 417 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 PRKCSHP14314 528 aaPredicted RBP22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 FGL2Q14314 439 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 TAF3Q5VWG9 929 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 Q6ZSR6 202 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 DCP2Q8IU60 420 aaKnown RBP22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 BAP1Q92560 729 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 CFAP57Q96MR6 1250 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 HEPHQ9BQS7 1158 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 ZYG11BQ9C0D3 744 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 ATP13A1Q9HD20 1204 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 PPARGC1AQ9UBK2 798 aaKnown RBP22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 FADS3Q9Y5Q0 445 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 MYLKQ15746 1914 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 BPTFQ12830 3046 aa22.13■■□□□ 1.13
SMARCC2-210ENST00000550519 GCN1Q92616 2671 aaKnown RBP22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 FAM170AA1A519 330 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 A6NNZ2 444 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 ADRB3P13945 408 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms