RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TRIM43BA6NCK2 446 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 RPS12P25398 132 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ZNF143P52747 638 aaPredicted RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ACTR3P61158 418 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ANGPT1Q15389 498 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ASTE1Q2TB18 679 aaPredicted RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 HYIQ5T013 277 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 METTL21CQ5VZV1 264 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 NEPROQ6NW34 567 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 SLC44A2Q8IWA5 706 aaPredicted RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 DSELQ8IZU8 1212 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ZFAND2BQ8WV99 257 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 NPAS2Q99743 824 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 SNX15Q9NRS6 342 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 MOSPD1Q9UJG1 213 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 CRTAMO95727 393 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 KRT6AP02538 564 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 CCNB1P14635 433 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 YWHAZP63104 245 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 RNF19BQ6ZMZ0 732 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 CHST13Q8NET6 341 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 KBTBD8Q8NFY9 601 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 PROX1Q92786 737 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 C19orf60Q96EN9 201 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ZFYVE28Q9HCC9 887 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 DNAAF2Q9NVR5 837 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 INVSQ9Y283 1065 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 LRRC42Q9Y546 428 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 TMEM191CA6NGB0 347 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 CABYRO75952 493 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 TSPAN9O75954 239 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 TRUB2O95900 331 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ITGA1P56199 1179 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ILF2Q12905 390 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 RDH11Q8TC12 318 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 OLFM1Q99784 485 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 CXorf21Q9HAI6 301 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 CRNNQ9UBG3 495 aaPredicted RBP16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 ENOPH1Q9UHY7 261 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
RBFOX1-212ENST00000550418 SLC16A1P53985 500 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 KLHL12Q53G59 568 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 ARHGAP36Q6ZRI8 547 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 SLCO6A1Q86UG4 719 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 DDX4Q9NQI0 724 aaKnown RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 DNAJB4Q9UDY4 337 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 COQ6Q9Y2Z9 468 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 GTF3C5Q9Y5Q8 519 aaPredicted RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 PSMD10O75832 226 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 TSNQ15631 228 aaKnown RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 INO80DQ53TQ3 878 aaPredicted RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 NIPA1Q7RTP0 329 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 CYP4X1Q8N118 509 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 B3GALNT2Q8NCR0 500 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 CLPBQ9H078 707 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 PXMP2Q9NR77 195 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 TAS2R13Q9NYV9 303 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 EGFL7Q9UHF1 273 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 LEF1Q9UJU2 399 aaPredicted RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 SERPIND1P05546 499 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 SPATA31C1P0DKV0 1188 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 MLNP12872 115 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 RAB15P59190 212 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 SPIRE1Q08AE8 756 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 DENND5AQ6IQ26 1287 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 ATP6V0D2Q8N8Y2 350 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 ZNF540Q8NDQ6 660 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 OR6J1Q8NGC5 347 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 OMDQ99983 421 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 REEP1Q9H902 201 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 KLK14Q9P0G3 267 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 AP3M1Q9Y2T2 418 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 TRIM17Q9Y577 477 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 PRR23AA6NEV1 266 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 PLSCR1O15162 318 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 ZBTB11O95625 1053 aaPredicted RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 LTA4HP09960 611 aaKnown RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 HOXB8P17481 243 aaPredicted RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 TKTL1P51854 596 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 TRAP1Q12931 704 aaKnown RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 GALNT18Q6P9A2 607 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 KCTD4Q8WVF5 259 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 KREMEN1Q96MU8 473 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 ZDHHC15Q96MV8 337 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 ATXN3LQ9H3M9 355 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 SERHL2Q9H4I8 314 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 SERHLQ9NQF3 203 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 RPRD1BQ9NQG5 326 aaKnown RBP16■□□□□ 0.15
RBFOX1-212ENST00000550418 DYRK4Q9NR20 520 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 GIN1Q9NXP7 522 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 DLG5Q8TDM6 1919 aa16■□□□□ 0.15
RBFOX1-212ENST00000550418 HS6ST3Q8IZP7 471 aa15.99■□□□□ 0.15
RBFOX1-212ENST00000550418 CENPIQ92674 756 aaPredicted RBP15.99■□□□□ 0.15
RBFOX1-212ENST00000550418 NKD2Q969F2 451 aaPredicted RBP15.99■□□□□ 0.15
RBFOX1-212ENST00000550418 POMPQ9Y244 141 aa15.99■□□□□ 0.15
RBFOX1-212ENST00000550418 GMPPBQ9Y5P6 360 aa15.99■□□□□ 0.15
RBFOX1-212ENST00000550418 MGAT4DA6NG13 374 aa15.99■□□□□ 0.15
RBFOX1-212ENST00000550418 IL1R1P14778 569 aa15.99■□□□□ 0.15
RBFOX1-212ENST00000550418 MZF1P28698 734 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms