RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 KRT83P78385 493 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 SLC6A3Q01959 620 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 ZNF177Q13360 481 aaPredicted RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 EIF4EBP2Q13542 120 aaPredicted RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3GQ6DHY5 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3CQ6IPX1 549 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 Q6ZVU0 165 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 H2AFVQ71UI9 128 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 SLC26A9Q7LBE3 791 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 C14orf80Q86SX3 495 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 TBC1D3Q8IZP1 549 aaPredicted RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 ACRBPQ8NEB7 543 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 SKA1Q96BD8 255 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 ELF4Q99607 663 aaPredicted RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 PACSIN1Q9BY11 444 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 MUC3BQ9H195 1237 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 CCDC86Q9H6F5 360 aaKnown RBP13.75□□□□□ -0.21
NUP188-211ENST00000550219 SNX10Q9Y5X0 201 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 PCNX2A6NKB5 2137 aa13.75□□□□□ -0.21
NUP188-211ENST00000550219 A0A1B0GTQ1 180 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 CBX4O00257 560 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 TAF4O00268 1085 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 WNT9AO14904 365 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 PJA2O43164 708 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 TNFSF14O43557 240 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 PCDHGA12O60330 932 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 IPO7O95373 1038 aaKnown RBP13.74□□□□□ -0.21
NUP188-211ENST00000550219 CYP1A2P05177 515 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 ITGAVP06756 1048 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 RHOCP08134 193 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 TFE3P19532 575 aaPredicted RBP13.74□□□□□ -0.21
NUP188-211ENST00000550219 RRM1P23921 792 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 NOS2P35228 1153 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 DRD3P35462 400 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 CCR5P51681 352 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 VAV2P52735 878 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 TCEAL1Q15170 157 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 C2CD6Q53TS8 623 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 PPP1R15BQ5SWA1 713 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 FAM102AQ5T9C2 384 aaPredicted RBP13.74□□□□□ -0.21
NUP188-211ENST00000550219 PLEKHA7Q6IQ23 1121 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 DBX2Q6ZNG2 339 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 ZNF662Q6ZS27 426 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 ARCQ7LC44 396 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 C3orf20Q8ND61 904 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 FRS2Q8WU20 508 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 DESI2Q9BSY9 194 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 THAP2Q9H0W7 228 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
NUP188-211ENST00000550219 GDF3Q9NR23 364 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 SARDHQ9UL12 918 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 STAP1Q9ULZ2 295 aa13.74□□□□□ -0.21
NUP188-211ENST00000550219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
NUP188-211ENST00000550219 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 GOLGA8SH3BPF8 625 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 CNTN5O94779 1100 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 PLK1P53350 603 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 DEUP1Q05D60 604 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 MAMLD1Q13495 774 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 DLG2Q15700 870 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 FAM46CQ5VWP2 391 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 NAPEPLDQ6IQ20 393 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 C19orf48Q6RUI8 117 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 DHRS13Q6UX07 377 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 TFAP2DQ7Z6R9 452 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 PIP4K2CQ8TBX8 421 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 ZNF653Q96CK0 615 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 ARHGEF26Q96DR7 871 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 ALG14Q96F25 216 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 MYOCQ99972 504 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 FEM1AQ9BSK4 669 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 TKTL2Q9H0I9 626 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.73□□□□□ -0.21
NUP188-211ENST00000550219 CNOT8Q9UFF9 292 aaKnown RBP13.73□□□□□ -0.21
NUP188-211ENST00000550219 TMEM59LQ9UK28 342 aa13.73□□□□□ -0.21
NUP188-211ENST00000550219 CFAP47Q6ZTR5 3102 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 A0A1W2PR77 199 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 RCCD1A6NED2 376 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 BTNL10A8MVZ5 291 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 ATP9BO43861 1147 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 DFNA5O60443 496 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 SNAP91O60641 907 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 CLDN11O75508 207 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 CCDC175P0C221 793 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 EPHA8P29322 1005 aaPredicted RBP13.72□□□□□ -0.21
NUP188-211ENST00000550219 CDH4P55283 916 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 CLDN6P56747 220 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 CNTN1Q12860 1018 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 MTA1Q13330 715 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 ALFQ53S48 1182 aa13.72□□□□□ -0.21
NUP188-211ENST00000550219 PRPF39Q86UA1 669 aaKnown RBP13.72□□□□□ -0.21
NUP188-211ENST00000550219 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms