RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FFAR2O15552 330 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 KLK10O43240 276 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 HSF2BPO75031 334 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 PAGE1O75459 146 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 CSF2P04141 144 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 PRNPP04156 253 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 PRLRP16471 622 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 GNA15P30679 374 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 NOS2P35228 1153 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 IRAK1P51617 712 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SKOR1P84550 965 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 CENPCQ03188 943 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SLC20A2Q08357 652 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 VAC14Q08AM6 782 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 PDCLQ13371 301 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ISXQ2M1V0 245 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ARSIQ5FYB1 569 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ACBD5Q5T8D3 534 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ARHGAP40Q5TG30 622 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ZCCHC8Q6NZY4 707 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 GCNT7Q6ZNI0 430 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ERN2Q76MJ5 926 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 C14orf80Q86SX3 495 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SETD3Q86TU7 594 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ZSCAN30Q86W11 494 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SLC22A18ASQ8N1D0 253 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ATP11CQ8NB49 1132 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 TPCN2Q8NHX9 752 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 KCNE4Q8WWG9 221 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 TTC9Q92623 222 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 ARRDC3Q96B67 414 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 NAF1Q96HR8 494 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 C1orf74Q96LT6 269 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SLC46A1Q96NT5 459 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 LENG8Q96PV6 779 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 PSMB7Q99436 277 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 C2orf49Q9BVC5 232 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SRRTQ9BXP5 876 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 CALN1Q9BXU9 219 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SLC17A9Q9BYT1 436 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 FAM204AQ9H8W3 233 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 CPNE5Q9HCH3 593 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 DYRK4Q9NR20 520 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 THSD1Q9NS62 852 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 SALL4Q9UJQ4 1053 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 PCDHGA8Q9Y5G5 932 aa10.08□□□□□ -0.8
TRAFD1-207ENST00000550051 TENM4Q6N022 2769 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 DOCK4Q8N1I0 1966 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 COL27A1Q8IZC6 1860 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 SPTY2D1-AS1A0A0U1RR47 76 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 EME2A4GXA9 379 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 POM121BA6NF01 834 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 A6NNZ2 444 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 K7ERQ8 282 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 RNF103O00237 685 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 TPP1O14773 563 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 THAP12O43422 761 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 SMAD6O43541 496 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 AP1G1O43747 822 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 BNIP3LO60238 219 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 PCDH8O95206 1070 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 AFPP02771 609 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 C6P13671 934 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 CXCR3P49682 368 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 CLDN2P57739 230 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 SNX16P57768 344 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 RPS21P63220 83 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 NME3Q13232 169 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 FZD2Q14332 565 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 BRMS1LQ5PSV4 323 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 C11orf57Q6ZUT1 292 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 ZNF683Q8IZ20 524 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 CHST14Q8NCH0 376 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 ZNF397Q8NF99 534 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 IFI44Q8TCB0 444 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 MAPK15Q8TD08 544 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 ASB12Q8WXK4 309 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 NT5C3BQ969T7 300 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 CCDC97Q96F63 343 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 PRR11Q96HE9 360 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 FEM1CQ96JP0 617 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 CPXM1Q96SM3 734 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 MYOCQ99972 504 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 INTS2Q9H0H0 1204 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 MUC3BQ9H195 1237 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 OSBPL2Q9H1P3 480 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 WDCPQ9H6R7 721 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 FZD3Q9NPG1 666 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 ACP6Q9NPH0 428 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 DNAJC28Q9NX36 388 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 ARHGEF38Q9NXL2 777 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 RRN3Q9NYV6 651 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 IL36AQ9UHA7 158 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 VPS51Q9UID3 782 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAFD1-207ENST00000550051 SYNJ2BP-COX16A0A087WUM0 186 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms