RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SERPINA13PQ6UXR4 307 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 GSTA5Q7RTV2 222 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 ZC3H18Q86VM9 953 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 C12orf40Q86WS4 652 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 CTAGE4Q8IX94 777 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 CCDC105Q8IYK2 499 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 SIX5Q8N196 739 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 SH2D3CQ8N5H7 860 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 TEX26Q8N6G2 289 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 ZNF513Q8N8E2 541 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 ST13P5Q8NFI4 369 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 TTC8Q8TAM2 541 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 HTR3CQ8WXA8 447 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 EDAQ92838 391 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 RTP4Q96DX8 246 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 LRIG1Q96JA1 1093 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 PSKH2Q96QS6 385 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 POLR1EQ9GZS1 481 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 PDFQ9HBH1 243 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 THAP10Q9P2Z0 257 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 MUTYHQ9UIF7 546 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 CA14Q9ULX7 337 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 ERVW-1Q9UQF0 538 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
SMARCD1-206ENST00000549274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 C5orf60A6NFR6 353 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 SGK1O00141 431 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 ZNF185O15231 689 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 KCNN4O15554 427 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 PSMD3O43242 534 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 RNASEH1O60930 286 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 ZMPSTE24O75844 475 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 TMCC1O94876 653 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 ECEL1O95672 775 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 GSRP00390 522 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 COILP38432 576 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 MMP13P45452 471 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 RPS9P46781 194 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 SLC6A11P48066 632 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 SOX9P48436 509 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 RHOAP61586 193 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 AP1S1P61966 158 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 ARF5P84085 180 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 SLC10A2Q12908 348 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 CCINQ13939 588 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 PRPSAP1Q14558 356 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 OASLQ15646 514 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 TEX44Q53QW1 395 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 ASTLQ6HA08 431 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 CCDC137Q6PK04 289 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 NPNTQ6UXI9 565 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 ADAT2Q7Z6V5 191 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 CHPFQ8IZ52 775 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 APCDD1Q8J025 514 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 SPATA4Q8NEY3 305 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 SLCO2A1Q92959 643 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 CHFRQ96EP1 664 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 P2RY11Q96G91 374 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 MS4A14Q96JA4 679 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 GDAP1L1Q96MZ0 367 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 TUBGCP5Q96RT8 1024 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 IL12RB2Q99665 862 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 OSBPL1AQ9BXW6 950 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 LTB4R2Q9NPC1 389 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 PAK5Q9P286 719 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 KLHL8Q9P2G9 620 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 PCYOX1Q9UHG3 505 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 INTS6Q9UL03 887 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 DNPEPQ9ULA0 475 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 CLEC4EQ9ULY5 219 aa9.94□□□□□ -0.82
SMARCD1-206ENST00000549274 FAM187AA6NFU0 413 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 CHURC1-FNTBB4DL54 471 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 SMAPO00193 183 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 AP3B1O00203 1094 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 RNF103O00237 685 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 SYNCRIPO60506 623 aaKnown RBP9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 GCATO75600 419 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ANXA9O76027 345 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 SRCP12931 536 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 FDFT1P37268 417 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ADCY2Q08462 1091 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ENPP2Q13822 863 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ELAVL3Q14576 367 aaKnown RBP9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ZNF234Q14588 700 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 UBXN2BQ14CS0 331 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 LLGL1Q15334 1064 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 SIX1Q15475 284 aaPredicted RBP9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ACCSLQ4AC99 568 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 GLE1Q53GS7 698 aaKnown RBP9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 FAM46CQ5VWP2 391 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ALG1LQ6GMV1 187 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 FSTL4Q6MZW2 842 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 C22orf39Q6P5X5 142 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ARHGEF18Q6ZSZ5 1173 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 PCGF5Q86SE9 256 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 ALLCQ8N6M5 410 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 PRELID2Q8N945 189 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 PJA1Q8NG27 643 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 OR52K2Q8NGK3 314 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms