RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PRPF18Q99633 342 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 MLPHQ9BV36 600 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SNX25Q9H3E2 840 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SUDS3Q9H7L9 328 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 LRRC4Q9HBW1 653 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CHRAC1Q9NRG0 131 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 TMPRSS4Q9NRS4 437 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CIDEBQ9UHD4 219 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 APPL1Q9UKG1 709 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 UBQLN1Q9UMX0 589 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 RUVBL2Q9Y230 463 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 UNCXA6NJT0 531 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 TRPC5OSA6NMA1 111 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 NPHS1O60500 1241 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 VAPBO95292 243 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CD4P01730 458 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC35E2BP0CK96 405 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ATP6V1B1P15313 513 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ZNF26P17031 533 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 YY1P25490 414 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ADRA1BP35368 520 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ABCG1P45844 678 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CCR10P46092 362 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 CDKL1Q00532 357 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SCAPQ12770 1279 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SEMA3BQ13214 749 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 USP10Q14694 798 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 C6orf52Q5T4I8 152 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 NXNQ6DKJ4 435 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 LRRC8EQ6NSJ5 796 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 KLC3Q6P597 504 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC27A1Q6PCB7 646 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ALKAL1Q6UXT8 129 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 FSTL5Q8N475 847 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 KCTD13Q8WZ19 329 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 LZICQ8WZA0 190 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 PPP1R36Q96LQ0 422 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 ZNF560Q96MR9 790 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 HNRNPABQ99729 332 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 KIFC1Q9BW19 673 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 DUSP16Q9BY84 665 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 HACD3Q9P035 362 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 HSFX1Q9UBD0 423 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 SUCOQ9UBS9 1254 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 G3BP2Q9UN86 482 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 HES2Q9Y543 173 aa10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 COPG1Q9Y678 874 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-205ENST00000548573 TSC2P49815 1807 aa10.02□□□□□ -0.8
SMARCD1-205ENST00000548573 A0A0G2JLL6 359 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 CCDC160A6NGH7 325 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 ASB14A6NK59 587 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 RNASEH2AO75792 299 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 C8BP07358 591 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 F7P08709 466 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PSMC3P17980 439 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 NMBRP28336 390 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TKTP29401 623 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 HOXA11P31270 313 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 MSX2P35548 267 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PNPLA4P41247 253 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TXNL4AP83876 142 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 EN1Q05925 392 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 CDH17Q12864 832 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 NME3Q13232 169 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PTK2BQ14289 1009 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 GK3PQ14409 553 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PPP2R5DQ14738 602 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 UGP2Q16851 508 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 MGAT5BQ3V5L5 792 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TMEM198Q66K66 360 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 NAPEPLDQ6IQ20 393 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 IYDQ6PHW0 289 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 LIMS2Q7Z4I7 341 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PRRT2Q7Z6L0 340 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 CHERPQ8IWX8 916 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 RNF148Q8N7C7 305 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 KDM1BQ8NB78 822 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 APPL2Q8NEU8 664 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 CEP70Q8NHQ1 597 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TRPM4Q8TD43 1214 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 NDRG1Q92597 394 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 MOCOSQ96EN8 888 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 SCYL1Q96KG9 808 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 ZNF597Q96LX8 424 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 HAUS8Q9BT25 410 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PIGVQ9NUD9 493 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 ACOT9Q9Y305 439 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 ZNF638Q14966 1978 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 SYNJ2BP-COX16A0A087WUM0 186 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 FAM72CH0Y354 149 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 STX16-NPEPL1H3BU86 382 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PHGDHO43175 533 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 PSMD3O43242 534 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 DLX3O60479 287 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 JUNP05412 331 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 NFKB1P19838 968 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 RANBP1P43487 201 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 INHBCP55103 352 aa10.02□□□□□ -0.81
SMARCD1-205ENST00000548573 TPI1P60174 286 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms