RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 MARCH2Q9P0N8 246 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 ARHGAP20Q9P2F6 1191 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 CA5BQ9Y2D0 317 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 SIK3Q9Y2K2 1263 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 FHOD1Q9Y613 1164 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 CSMD2Q7Z408 3487 aa14.41□□□□□ -0.1
PTCH1-217ENST00000548420 CCDC187A0A096LP49 1063 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 A0A1W2PP55 124 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 PRKCGP05129 697 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 FYNP06241 537 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 LIPCP11150 499 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 USP8P40818 1118 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 BPIFB4P59827 614 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 EFEMP1Q12805 493 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 TRIP4Q15650 581 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-217ENST00000548420 FNDC3BQ53EP0 1204 aaKnown RBP14.4□□□□□ -0.1
PTCH1-217ENST00000548420 ZNF776Q68DI1 518 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-217ENST00000548420 MSANTD2Q6P1R3 559 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 GUSBP11Q6P575 273 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 BORAQ6PGQ7 559 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 RBM44Q6ZP01 1051 aaKnown RBP14.4□□□□□ -0.1
PTCH1-217ENST00000548420 BEND5Q7L4P6 421 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 SLC47A2Q86VL8 602 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 GANCQ8TET4 914 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 CLEC4CQ8WTT0 213 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 NAT10Q9H0A0 1025 aaKnown RBP14.4□□□□□ -0.1
PTCH1-217ENST00000548420 RSPH9Q9H1X1 276 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-217ENST00000548420 TUBD1Q9UJT1 453 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 NCKAP1Q9Y2A7 1128 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 ZNF510Q9Y2H8 683 aa14.4□□□□□ -0.1
PTCH1-217ENST00000548420 LGALS16A8MUM7 142 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 PES1O00541 588 aaKnown RBP14.39□□□□□ -0.11
PTCH1-217ENST00000548420 MID1O15344 667 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 LATO43561 262 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 LTFP02788 710 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 PNMA6AP0CW24 399 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-217ENST00000548420 HGFP14210 728 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 PRF1P14222 555 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 CDKN3Q16667 212 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 SLC45A4Q5BKX6 768 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 NAPEPLDQ6IQ20 393 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 FAM217AQ8IXS0 508 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 AOPEPQ8N6M6 819 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 EDEM1Q92611 657 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 ERGIC2Q96RQ1 377 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 DCLK3Q9C098 648 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 RASAL2Q9UJF2 1139 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 LSM7Q9UK45 103 aaKnown RBP14.39□□□□□ -0.11
PTCH1-217ENST00000548420 STRIP2Q9ULQ0 834 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 HBS1LQ9Y450 684 aaKnown RBP14.39□□□□□ -0.11
PTCH1-217ENST00000548420 DAAM1Q9Y4D1 1078 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 SVILO95425 2214 aa14.39□□□□□ -0.11
PTCH1-217ENST00000548420 SLC12A8A0AV02 714 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 LRRC72A6NJI9 287 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 K7ESM1 405 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 PIK3R2O00459 728 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 SART1O43290 800 aaKnown RBP14.38□□□□□ -0.11
PTCH1-217ENST00000548420 TIMM44O43615 452 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 PIAS2O75928 621 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 NEBLO76041 1014 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 TPM2P07951 284 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 ATP1A3P13637 1013 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 PTMSP20962 102 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 CDH5P33151 784 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-217ENST00000548420 UGT1A5P35504 534 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 KLK7P49862 253 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 JAM2P57087 298 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 PDCLQ13371 301 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 IQCB1Q15051 598 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 PERM1Q5SV97 790 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 ZFAND4Q86XD8 727 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 JAMLQ86YT9 394 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 RNF139Q8WU17 664 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 PLD4Q96BZ4 506 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 MIS12Q9H081 205 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 FBRSQ9HAH7 460 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 STOML2Q9UJZ1 356 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 AGO1Q9UL18 857 aaKnown RBP14.38□□□□□ -0.11
PTCH1-217ENST00000548420 ABCA2Q9BZC7 2435 aa14.38□□□□□ -0.11
PTCH1-217ENST00000548420 CPED1A4D0V7 1026 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 SMTNL1A8MU46 457 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 E5RJQ4 531 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 F8VZ95 297 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 PLD2O14939 933 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 EPHB6O15197 1021 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 IGLV3-27P01718 113 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 CYP11B1P15538 503 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 CDK11BP21127 795 aaKnown RBP14.37□□□□□ -0.11
PTCH1-217ENST00000548420 CORO1AP31146 461 aaKnown RBP14.37□□□□□ -0.11
PTCH1-217ENST00000548420 CHKAP35790 457 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 HARS2P49590 506 aaKnown RBP14.37□□□□□ -0.11
PTCH1-217ENST00000548420 ZNF165P49910 485 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
PTCH1-217ENST00000548420 RAPGEF1Q13905 1077 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 HS1BP3Q53T59 392 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 EFL1Q7Z2Z2 1120 aaKnown RBP14.37□□□□□ -0.11
PTCH1-217ENST00000548420 B3GNT8Q7Z7M8 397 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 ADIPOR2Q86V24 386 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms