RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PAX3P23760 479 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 ETFBP38117 255 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 PCYT1AP49585 367 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 ZNF157P51786 506 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 C4orf22Q6V702 233 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 SCARA5Q6ZMJ2 495 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 GADL1Q6ZQY3 521 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 KCTD8Q6ZWB6 473 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 SAPCD2Q86UD0 394 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 IGFN1Q86VF2 1251 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 ANKFN1Q8N957 763 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 WNK4Q96J92 1243 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 UHRF1Q96T88 793 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 MSTO1Q9BUK6 570 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 ADI1Q9BV57 179 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 GATA5Q9BWX5 397 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 UNKQ9C0B0 810 aaKnown RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 GBA3Q9H227 469 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 ACSS2Q9NR19 701 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 SEPT3Q9UH03 358 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 KCNH4Q9UQ05 1017 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 TCRBV3S1A0A5B6 114 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 TRIM64A6NGJ6 449 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 SAC3D1A6NKF1 404 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 H0YCG3 227 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 PFDN6O15212 129 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 DYNC1LI2O43237 492 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 NDUFB5O43674 189 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 PRPSAP2O60256 369 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 PLA2G6O60733 806 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 H2AFYO75367 372 aaKnown RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 BCL10O95999 233 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 LDHAP00338 332 aaKnown RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 LTFP02788 710 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 TFEBP19484 476 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 GTF2A2P52657 109 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 MAPK10P53779 464 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 MYL6P60660 151 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 MRPS9P82933 396 aaKnown RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 RALGDSQ12967 914 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 PDK2Q15119 407 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 NEDD8Q15843 81 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 SEZ6Q53EL9 994 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 FRA10AC1Q70Z53 315 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 ATXN7L3BQ96GX2 97 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 TCF12Q99081 682 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 HGH1Q9BTY7 390 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 NIF3L1Q9GZT8 377 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 RPAP3Q9H6T3 665 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 TRPV5Q9NQA5 729 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 PIH1D1Q9NWS0 290 aaKnown RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 MTMR10Q9NXD2 777 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 TMEM9Q9P0T7 183 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 COPG1Q9Y678 874 aaKnown RBP10.86□□□□□ -0.67
NPAS3-205ENST00000547068 STYXL1Q9Y6J8 313 aa10.86□□□□□ -0.67
NPAS3-205ENST00000547068 A0A0G2JLL6 359 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 HEATR9A2RTY3 570 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 F5H423 210 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 GRID2O43424 1007 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 ATG7O95352 703 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 PIGNO95427 931 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 BMP2P12643 396 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 SFNP31947 248 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 GP5P40197 560 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 GSSP48637 474 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 HSD17B4P51659 736 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 MERTKQ12866 999 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 TRAP1Q12931 704 aaKnown RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 NAB1Q13506 487 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 DGKZQ13574 1117 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 OXA1LQ15070 435 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 KCNJ8Q15842 424 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 PHKG1Q16816 387 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 CDO1Q16878 200 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 RAB6CQ53S08 254 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 RGMBQ6NW40 437 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 FAM117BQ6P1L5 589 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 KCNT2Q6UVM3 1135 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 CYP4V2Q6ZWL3 525 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 PRRT2Q7Z6L0 340 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 CAMK1DQ8IU85 385 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 CBR4Q8N4T8 237 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 MCPH1Q8NEM0 835 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 HPS1Q92902 700 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 ATP6V0A1Q93050 837 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 EFHD2Q96C19 240 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 ANKRD36BP1Q96IX9 119 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 DHRS1Q96LJ7 313 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 NSMCE3Q96MG7 304 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 APBA2Q99767 749 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 ADPGKQ9BRR6 497 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 RAB6CQ9H0N0 254 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 POLR3FQ9H1D9 316 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 SACM1LQ9NTJ5 587 aa10.85□□□□□ -0.67
NPAS3-205ENST00000547068 UTP6Q9NYH9 597 aaKnown RBP10.85□□□□□ -0.67
NPAS3-205ENST00000547068 CPQQ9Y646 472 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms