RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 PDIA4P13667 645 aaKnown RBP15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 TSHRP16473 764 aa15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 TBX4P57082 545 aa15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 ADIGQ0VDE8 80 aa15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 DLG2Q15700 870 aa15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 SV2AQ7L0J3 742 aa15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 UNC45BQ8IWX7 931 aa15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 TAF4BQ92750 862 aa15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 INTS4Q96HW7 963 aaKnown RBP15.78■□□□□ 0.12
CLSTN3-216ENST00000545663 TYW5A2RUC4 315 aaKnown RBP15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 STMND1H3BQB6 276 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 EIF3DO15371 548 aaKnown RBP eCLIP15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 RABIFP47224 123 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 C16orf72Q14CZ0 275 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 HEATR4Q86WZ0 1026 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 CIR1Q86X95 450 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 FAM114A1Q8IWE2 563 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 PHACTR4Q8IZ21 702 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 LGI2Q8N0V4 545 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 GALNT11Q8NCW6 608 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 FAM174AQ8TBP5 190 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 AZIN2Q96A70 460 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 IPO9Q96P70 1041 aaKnown RBP15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 KLF6Q99612 283 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 CASS4Q9NQ75 786 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 ABCC13Q9NSE7 274 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 RNF215Q9Y6U7 377 aa15.77■□□□□ 0.12
CLSTN3-216ENST00000545663 DNHD1Q96M86 4753 aa15.77■□□□□ 0.11
CLSTN3-216ENST00000545663 ATP9BO43861 1147 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 HSP90AA1P07900 732 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 CD82P27701 267 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 STAT6P42226 847 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 PIK3CAP42336 1068 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 CUL4AQ13619 759 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 DEFB109BQ30KR1 87 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 C1orf220Q5T0J3 134 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 MSANTD2Q6P1R3 559 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 IL22RA1Q8N6P7 574 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 ARL10Q8N8L6 244 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 TEX19Q8NA77 164 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 ANKRD52Q8NB46 1076 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 SLC4A11Q8NBS3 891 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 BTN2A2Q8WVV5 523 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 FCRL2Q96LA5 508 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 CATSPER2Q96P56 530 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 CMKLR1Q99788 373 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 SEMA6CQ9H3T2 930 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 CYP3A43Q9HB55 503 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 LRRC4Q9HBW1 653 aa15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 CUEDC1Q9NWM3 386 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 FBXO2Q9UK22 296 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-216ENST00000545663 UNC13CQ8NB66 2214 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 PIK3R2O00459 728 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 SPTLC2O15270 562 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 ALOX15BO15296 676 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 GABBR2O75899 941 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 MOCS2O96007 188 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 ITGB7P26010 798 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 ATP1A2P50993 1020 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 PHF19Q5T6S3 580 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 RAP1GAP2Q684P5 730 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 PCDH19Q8TAB3 1148 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 DDX50Q9BQ39 737 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 SMC3Q9UQE7 1217 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 NAALADL1Q9UQQ1 740 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 CLIC4Q9Y696 253 aa15.75■□□□□ 0.11
CLSTN3-216ENST00000545663 TACC2O95359 2948 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 ZNF891A8MT65 544 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 H3BQV1 296 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 BMP15O95972 392 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 LCP1P13796 627 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 PRF1P14222 555 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 PDCP20941 246 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 OAS2P29728 719 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 CHRNA3P32297 505 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 UGT1A3P35503 534 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 ANP32AP39687 249 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 RAD23BP54727 409 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 GOLGA7BQ2TAP0 167 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 ATP1A1-AS1Q5TC04 95 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 FAXCQ5TGI0 409 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 ERN2Q76MJ5 926 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 CCNJLQ8IV13 435 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 SLITRK4Q8IW52 837 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 C12orf56Q8IXR9 622 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 CHST14Q8NCH0 376 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 OR52K2Q8NGK3 314 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 UBA3Q8TBC4 463 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 APOBEC4Q8WW27 367 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 ERCC4Q92889 916 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 TMEM159Q96B96 161 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 EPAS1Q99814 870 aa15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 TFIP11Q9UBB9 837 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-216ENST00000545663 TRPM6Q9BX84 2022 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 HIVEP3Q5T1R4 2406 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 FPGTO14772 594 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 CNTN5O94779 1100 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 MT-CO1P00395 513 aa15.73■□□□□ 0.11
CLSTN3-216ENST00000545663 PLK1P53350 603 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms