RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 DNPEPQ9ULA0 475 aa13.24□□□□□ -0.29
CDCA3-210ENST00000545368 FCF1Q9Y324 198 aaKnown RBP13.24□□□□□ -0.29
CDCA3-210ENST00000545368 BCLAF3A2AJT9 711 aaKnown RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 TMEM221A6NGB7 291 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 M0R296 226 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 KCNK1O00180 336 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 KCNN4O15554 427 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 ATP9BO43861 1147 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 PHF2O75151 1096 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 KLF8O95600 359 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 MT-CO1P00395 513 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 CCNB1P14635 433 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 VAV1P15498 845 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 RBL1P28749 1068 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 NTSR1P30989 418 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 HSPA9P38646 679 aaKnown RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 IL12RB1P42701 662 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 MMP13P45452 471 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 RECQLP46063 649 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 RHOAP61586 193 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 IFI35P80217 286 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 SNX1Q13596 522 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 WHAMMP3Q1A5X7 153 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 EMC10Q5UCC4 262 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 DRICH1Q6PGQ1 229 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 B4GALNT4Q76KP1 1039 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 PCDH20Q8N6Y1 951 aaKnown RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 PRELID2Q8N945 189 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 C12orf50Q8NA57 414 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 SLC35B2Q8TB61 432 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 USP33Q8TEY7 942 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 NKD2Q969F2 451 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 MAGOHBQ96A72 148 aaKnown RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 CCDC114Q96M63 670 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 VAT1Q99536 393 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 CACNA2D2Q9NY47 1150 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 SUN2Q9UH99 717 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 SLCO3A1Q9UIG8 710 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 ZNF148Q9UQR1 794 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 MTF2Q9Y483 593 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-210ENST00000545368 MRFAP1Q9Y605 127 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 ACTL7AQ9Y615 435 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 STON1Q9Y6Q2 735 aa13.23□□□□□ -0.29
CDCA3-210ENST00000545368 EDDM13A0A1B0GTR0 161 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 TTC34A8MYJ7 566 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 CCDC188H7C350 402 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 K7ERQ8 282 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 SGK1O00141 431 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 SYNCRIPO60506 623 aaKnown RBP13.22□□□□□ -0.29
CDCA3-210ENST00000545368 ATG13O75143 517 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 CD160O95971 181 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 PEX11BO96011 259 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 ITGAVP06756 1048 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 EPHX1P07099 455 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 MAGEA9P43362 315 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 FNTAP49354 379 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 SNRPD1P62314 119 aaKnown RBP13.22□□□□□ -0.29
CDCA3-210ENST00000545368 LMNB2Q03252 620 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 SLC10A7Q0GE19 358 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 STARD3Q14849 445 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 DLG2Q15700 870 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 EOGTQ5NDL2 527 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 CCDC105Q8IYK2 499 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 ALLCQ8N6M5 410 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 IL17RCQ8NAC3 791 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 TXNDC5Q8NBS9 432 aaKnown RBP13.22□□□□□ -0.29
CDCA3-210ENST00000545368 ISG20Q96AZ6 181 aaKnown RBP13.22□□□□□ -0.29
CDCA3-210ENST00000545368 MYO19Q96H55 970 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 RUNDC3BQ96NL0 473 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 ACOX2Q99424 681 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 TMEM121Q9BTD3 319 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 IER2Q9BTL4 223 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 TMEM245Q9H330 911 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 RBM22Q9NW64 420 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDCA3-210ENST00000545368 KLHL8Q9P2G9 620 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-210ENST00000545368 AMACRQ9UHK6 382 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 HCN2Q9UL51 889 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-210ENST00000545368 TTLL3Q9Y4R7 772 aa13.22□□□□□ -0.29
CDCA3-210ENST00000545368 MYO18AQ92614 2054 aaKnown RBP13.21□□□□□ -0.29
CDCA3-210ENST00000545368 CHURC1-FNTBB4DL54 471 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 TNFRSF10AO00220 468 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 RNF103O00237 685 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 SMAD6O43541 496 aaKnown RBP13.21□□□□□ -0.29
CDCA3-210ENST00000545368 BNIP3LO60238 219 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 IGSF6O95976 241 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 GSRP00390 522 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 JCHAINP01591 159 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 HLA-EP13747 358 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 HOXB2P14652 356 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 PRKCHP24723 683 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 PTPN3P26045 913 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 STIP1P31948 543 aaKnown RBP13.21□□□□□ -0.29
CDCA3-210ENST00000545368 CHRNA3P32297 505 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 ACTN2P35609 894 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 WASP42768 502 aa13.21□□□□□ -0.29
CDCA3-210ENST00000545368 RPS9P46781 194 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms