RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 GABPB2Q8TAK5 448 aaPredicted RBP13.43□□□□□ -0.26
PCMTD1-208ENST00000544451 CXorf38Q8TB03 319 aa13.43□□□□□ -0.26
PCMTD1-208ENST00000544451 GATA6Q92908 595 aa13.43□□□□□ -0.26
PCMTD1-208ENST00000544451 ZMAT2Q96NC0 199 aaKnown RBP13.43□□□□□ -0.26
PCMTD1-208ENST00000544451 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
PCMTD1-208ENST00000544451 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
PCMTD1-208ENST00000544451 FAM72CH0Y354 149 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 KLF11O14901 512 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 ADCY6O43306 1168 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 BDNFP23560 247 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 CDH5P33151 784 aaPredicted RBP13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 CDH17Q12864 832 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 TBCELQ5QJ74 424 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 C6orf10Q5SRN2 563 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 FAM72AQ5TYM5 149 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 FAM72DQ6L9T8 149 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 SLC27A1Q6PCB7 646 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 B3GNT6Q6ZMB0 384 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 FAM72BQ86X60 149 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 OR9I1Q8NGQ6 314 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 RBBP8Q99708 897 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 CPA4Q9UI42 421 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 SORCS3Q9UPU3 1222 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 NUP205Q92621 2012 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 TCRBV5S1A1TA0A578 114 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 CAPN14A8MX76 684 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 BNIP3LO60238 219 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 TSPAN1O60635 241 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 STX5Q13190 355 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 UGP2Q16851 508 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 ZIK1Q3SY52 487 aaPredicted RBP13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 FOXB2Q5VYV0 432 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 TSPAN14Q8NG11 270 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 ACMSDQ8TDX5 336 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 SKA2Q8WVK7 121 aaPredicted RBP13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 LPPQ93052 612 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 PKP2Q99959 881 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 SP110Q9HB58 689 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 PREBQ9HCU5 417 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 XIRP1Q702N8 1843 aaKnown RBP13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 HEATR9A2RTY3 570 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 MDM4O15151 490 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 POMCP01189 267 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 IL10P22301 178 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 LRPAP1P30533 357 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 SLC7A2P52569 658 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 CAPRIN1Q14444 709 aaKnown RBP13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 TLR1Q15399 786 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 ZNF276Q8N554 614 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 FAM47BQ8NA70 645 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 CDC26Q8NHZ8 85 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 PIGVQ9NUD9 493 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 GIMAP2Q9UG22 337 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 BTRCQ9Y297 605 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 RAP2CQ9Y3L5 183 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 COMMD3-BMI1R4GMX3 469 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 SCN9AQ15858 1988 aa13.42□□□□□ -0.26
PCMTD1-208ENST00000544451 YJEFN3A6XGL0 299 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 H3BSA7 217 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 PSMD12O00232 456 aaPredicted RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 CD4P01730 458 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 MPOP05164 745 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 SEMA5AQ13591 1074 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 SV2CQ496J9 727 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 DNAJB14Q8TBM8 379 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 CNTN3Q9P232 1028 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 PCDHB12Q9Y5F1 795 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 HMX2A2RU54 273 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 MSI1O43347 362 aaKnown RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 ZNF23P17027 643 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 PTPN1P18031 435 aaKnown RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 RPS12P25398 132 aaKnown RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 CA8P35219 290 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 NOS2P35228 1153 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 ADARP55265 1226 aaKnown RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 IL23RQ5VWK5 629 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 LIPMQ5VYY2 423 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 ACTRT2Q8TDY3 377 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 DGCR14Q96DF8 476 aaKnown RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 IFT43Q96FT9 208 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 GAD1Q99259 594 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 IPO11Q9UI26 975 aaKnown RBP13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 SUPT3HB4E1H0 165 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 CLIC3O95833 236 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 CD1EP15812 388 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 PTPN3P26045 913 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 RGS2P41220 211 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 LIMK2P53671 638 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 SDHAF4Q5VUM1 108 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 FAM219BQ5XKK7 198 aa13.41□□□□□ -0.26
PCMTD1-208ENST00000544451 PARP8Q8N3A8 854 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms