RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 SNX10Q9Y5X0 201 aa23.13■■□□□ 1.29
CDKN3-207ENST00000543789 HS3ST3A1Q9Y663 406 aa23.13■■□□□ 1.29
CDKN3-207ENST00000543789 BPTFQ12830 3046 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 ARID1BQ8NFD5 2236 aaPredicted RBP23.12■■□□□ 1.29
CDKN3-207ENST00000543789 RNF103O00237 685 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 F9P00740 461 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 SEL1L3Q68CR1 1132 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 DCP2Q8IU60 420 aaKnown RBP23.12■■□□□ 1.29
CDKN3-207ENST00000543789 SLC22A18ASQ8N1D0 253 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 GRIN3AQ8TCU5 1115 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 PPP1R16AQ96I34 528 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 APOLD1Q96LR9 279 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 C1orf74Q96LT6 269 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 ZNF578Q96N58 590 aaPredicted RBP23.12■■□□□ 1.29
CDKN3-207ENST00000543789 DUSP23Q9BVJ7 150 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 TNKS2Q9H2K2 1166 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 TMEM51Q9NW97 253 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 RWDD2AQ9UIY3 292 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 STAP1Q9ULZ2 295 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 PAXBP1Q9Y5B6 917 aa23.12■■□□□ 1.29
CDKN3-207ENST00000543789 I6L893 689 aaPredicted RBP23.11■■□□□ 1.29
CDKN3-207ENST00000543789 SCAMP1O15126 338 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 ENDOD1O94919 500 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 TFE3P19532 575 aaPredicted RBP23.11■■□□□ 1.29
CDKN3-207ENST00000543789 SULT1E1P49888 294 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 DUSP3P51452 185 aaPredicted RBP23.11■■□□□ 1.29
CDKN3-207ENST00000543789 CXADRP78310 365 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 ACBD5Q5T8D3 534 aaPredicted RBP23.11■■□□□ 1.29
CDKN3-207ENST00000543789 GCNT7Q6ZNI0 430 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 DPY19L3Q6ZPD9 716 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 TFAP2DQ7Z6R9 452 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 SLC47A2Q86VL8 602 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 LSMEM2Q8N112 164 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 FAM181AQ8N9Y4 354 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 ZNF248Q8NDW4 579 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 NT5C3BQ969T7 300 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 PGAP3Q96FM1 320 aaPredicted RBP23.11■■□□□ 1.29
CDKN3-207ENST00000543789 BMFQ96LC9 184 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 DEPDC7Q96QD5 511 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 LGMNQ99538 433 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 ABCG4Q9H172 646 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 CAAP1Q9H8G2 361 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 USP29Q9HBJ7 922 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 EVA1BQ9NVM1 165 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 DNAJC28Q9NX36 388 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 MPP6Q9NZW5 540 aa23.11■■□□□ 1.29
CDKN3-207ENST00000543789 GCN1Q92616 2671 aaKnown RBP23.1■■□□□ 1.29
CDKN3-207ENST00000543789 GTPBP10A4D1E9 387 aaKnown RBP23.1■■□□□ 1.29
CDKN3-207ENST00000543789 A6NNZ2 444 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 FOXN3O00409 490 aaPredicted RBP23.1■■□□□ 1.29
CDKN3-207ENST00000543789 LEFTY1O75610 366 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 ZIC2O95409 532 aaPredicted RBP23.1■■□□□ 1.29
CDKN3-207ENST00000543789 GP1BAP07359 652 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 MYF5P13349 255 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 OR1E1P30953 314 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 CLCN1P35523 988 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 HNRNPKP61978 463 aaKnown RBP eCLIP23.1■■□□□ 1.29
CDKN3-207ENST00000543789 RPS21P63220 83 aaKnown RBP23.1■■□□□ 1.29
CDKN3-207ENST00000543789 DEUP1Q05D60 604 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 SLC20A2Q08357 652 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 TMEM259Q4ZIN3 620 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 ZNF542PQ5EBM4 170 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 C22orf39Q6P5X5 142 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 FEM1CQ96JP0 617 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 SPON2Q9BUD6 331 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 SLC17A9Q9BYT1 436 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 OSBPL2Q9H1P3 480 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 PLCB1Q9NQ66 1216 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 DNAJC12Q9UKB3 198 aa23.1■■□□□ 1.29
CDKN3-207ENST00000543789 IGLV3-10A0A075B6K4 115 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 K7ESM1 405 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 USP12O75317 370 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 PAK4O96013 591 aaPredicted RBP23.09■■□□□ 1.29
CDKN3-207ENST00000543789 MPOP05164 745 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 NEK3P51956 506 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 PCBP4P57723 403 aaKnown RBP23.09■■□□□ 1.29
CDKN3-207ENST00000543789 MAPK8IP2Q13387 824 aaPredicted RBP23.09■■□□□ 1.29
CDKN3-207ENST00000543789 RETSATQ6NUM9 610 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 PTAR1Q7Z6K3 402 aaPredicted RBP23.09■■□□□ 1.29
CDKN3-207ENST00000543789 OR7D4Q8NG98 312 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 NAF1Q96HR8 494 aaKnown RBP23.09■■□□□ 1.29
CDKN3-207ENST00000543789 HIC2Q96JB3 615 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 WASF2Q9Y6W5 498 aa23.09■■□□□ 1.29
CDKN3-207ENST00000543789 ILVBLA1L0T0 632 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 SRGAP2O75044 1071 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 ZNF821O75541 412 aaPredicted RBP23.08■■□□□ 1.29
CDKN3-207ENST00000543789 LSSP48449 732 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 BPIFB4P59827 614 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 GABREP78334 506 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 BECN1Q14457 450 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 SLC25A52Q3SY17 297 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 KIAA1161Q6NSJ0 714 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 ZNF783Q6ZMS7 281 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 TMEM35BQ8NCS4 154 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 TBCBQ99426 244 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 HEPHQ9BQS7 1158 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 CEP44Q9C0F1 390 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 PDCL3Q9H2J4 239 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 SIX2Q9NPC8 291 aa23.08■■□□□ 1.29
CDKN3-207ENST00000543789 TMPRSS4Q9NRS4 437 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms