RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 NOL6Q9H6R4 1146 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TMEM248Q9NWD8 314 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 WASF2Q9Y6W5 498 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PKD1L2Q7Z442 2459 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TBC1D3DA0A087WVF3 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3IA0A087WXS9 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3EA0A087X179 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3KA0A087X1G2 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CXorf51AA0A1B0GTR3 108 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FAM221BA6H8Z2 402 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3FA6NER0 549 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3LB9A6J9 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 H0Y8X5 98 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CBX4O00257 560 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3HP0C7X1 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 L1CAMP32004 1257 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PRKCIP41743 596 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 MAPKAPK2P49137 400 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SERPINH1P50454 418 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SHBQ15464 509 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3GQ6DHY5 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3CQ6IPX1 549 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DNAJC24Q6P3W2 148 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 C22orf39Q6P5X5 142 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 LRSAM1Q6UWE0 723 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DPY19L3Q6ZPD9 716 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ZNF571Q7Z3V5 609 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GLRX5Q86SX6 157 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TRIM69Q86WT6 500 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DNAAF5Q86Y56 855 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D3Q8IZP1 549 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ARFGAP1Q8N6T3 406 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ARHGEF2Q92974 986 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 VCPIP1Q96JH7 1222 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 MCEEQ96PE7 176 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CNPY3Q9BT09 278 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SCNM1Q9BWG6 230 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CEP44Q9C0F1 390 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TNKS2Q9H2K2 1166 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CBX8Q9HC52 389 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ATP13A1Q9HD20 1204 aa13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SEPT11Q9NVA2 429 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ZFYVE26Q68DK2 2539 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SYCE3A1L190 88 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DDX3XO00571 662 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 BNIP3LO60238 219 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PCDHGA12O60330 932 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DKK1O94907 266 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TNFAIP3P21580 790 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CD38P28907 300 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PBX1P40424 430 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ARSIQ5FYB1 569 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PRAMEF14Q5SWL7 426 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PLEKHA7Q6IQ23 1121 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RETSATQ6NUM9 610 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RWDD4Q6NW29 188 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 RAB44Q7Z6P3 723 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SLFN11Q7Z7L1 901 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SLCO6A1Q86UG4 719 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TBC1D31Q96DN5 1066 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HDAC8Q9BY41 377 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 EDEM3Q9BZQ6 932 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HAUS4Q9H6D7 363 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TOR4AQ9NXH8 423 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 DNAI1Q9UI46 699 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FZD10Q9ULW2 581 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 BTBD3Q9Y2F9 522 aa13.38□□□□□ -0.27
TNFRSF1A-215ENST00000543359 A0A1B0GTQ1 180 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 WASH4PA8MWX3 477 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HYAL3O43820 417 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 LEFTY1O75610 366 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PRNPP04156 253 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GZMAP12544 262 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FILIP1LQ4L180 1135 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 CARD16Q5EG05 197 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FIGNQ5HY92 759 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 HGSNATQ68CP4 663 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PCDH20Q8N6Y1 951 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SETD7Q8WTS6 366 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 GATA6Q92908 595 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 SERAC1Q96JX3 654 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TRIM7Q9C029 511 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KLC2Q9H0B6 622 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 MAGEH1Q9H213 219 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 PREBQ9HCU5 417 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 IL36AQ9UHA7 158 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KLK13Q9UKR3 277 aa13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TRPM6Q9BX84 2022 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TMEM191CA6NGB0 347 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TMCO5BA8MYB1 307 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 TLR4O00206 839 aa13.36□□□□□ -0.27
TNFRSF1A-215ENST00000543359 KPNA3O00505 521 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms