RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MBD3O95983 291 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 CAPNS1P04632 268 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 CALB1P05937 261 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 ITGAVP06756 1048 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 CDK4P11802 303 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 GEMIN4P57678 1058 aaKnown RBP15.97■□□□□ 0.15
VPS33A-206ENST00000542310 TAS2R38P59533 333 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 ATP11AP98196 1134 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 GNA12Q03113 381 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 PTP4A2Q12974 167 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 SYCP1Q15431 976 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 CCDC14Q49A88 953 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 ZSCAN30Q86W11 494 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 PROSER1Q86XN7 944 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 PHF13Q86YI8 300 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-206ENST00000542310 TMEM145Q8NBT3 493 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 C3orf20Q8ND61 904 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 OR7D4Q8NG98 312 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 RXFP2Q8WXD0 754 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 CENPIQ92674 756 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-206ENST00000542310 NTAN1Q96AB6 310 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 IL36AQ9UHA7 158 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 NEU3Q9UQ49 428 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 CHD6Q8TD26 2715 aa15.97■□□□□ 0.15
VPS33A-206ENST00000542310 ARID1BQ8NFD5 2236 aaPredicted RBP15.96■□□□□ 0.15
VPS33A-206ENST00000542310 PKD1L2Q7Z442 2459 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 LRRC10BA6NIK2 292 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 CBX4O00257 560 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 RHOQP17081 205 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 GLDCP23378 1020 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 ADRA1BP35368 520 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 ARF5P84085 180 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 SCAPQ12770 1279 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 STAT4Q14765 748 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 SMAD1Q15797 465 aaKnown RBP15.96■□□□□ 0.15
VPS33A-206ENST00000542310 CDO1Q16878 200 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 CLEC16AQ2KHT3 1053 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 C15orf59Q2T9L4 293 aaPredicted RBP15.96■□□□□ 0.15
VPS33A-206ENST00000542310 POM121L1PQ3SYA9 428 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 SFMBT2Q5VUG0 894 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 LINGO4Q6UY18 593 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 ERN2Q76MJ5 926 aaKnown RBP15.96■□□□□ 0.15
VPS33A-206ENST00000542310 NLRP14Q86W24 1093 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 PLPP6Q8IY26 295 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 SLC30A5Q8TAD4 765 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 FAM174AQ8TBP5 190 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 ISG20Q96AZ6 181 aaKnown RBP15.96■□□□□ 0.15
VPS33A-206ENST00000542310 ARRDC3Q96B67 414 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 TMEM248Q9NWD8 314 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 ADAM22Q9P0K1 906 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 DKK4Q9UBT3 224 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 OR12D3Q9UGF7 316 aa15.96■□□□□ 0.15
VPS33A-206ENST00000542310 FAM170AA1A519 330 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 ENC1O14682 589 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 ZNF821O75541 412 aaPredicted RBP15.95■□□□□ 0.14
VPS33A-206ENST00000542310 C1SP09871 688 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 KRT3P12035 628 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 ITGB7P26010 798 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 MAT2AP31153 395 aaKnown RBP15.95■□□□□ 0.14
VPS33A-206ENST00000542310 NEK3P51956 506 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 HDAC4P56524 1084 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 UBXN1Q04323 297 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 C1QBPQ07021 282 aaKnown RBP15.95■□□□□ 0.14
VPS33A-206ENST00000542310 CCDC183Q5T5S1 534 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 DPY19L3Q6ZPD9 716 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 MON1BQ7L1V2 547 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 KANSL1Q7Z3B3 1105 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 HORMAD1Q86X24 394 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 SPATS2Q86XZ4 545 aaKnown RBP15.95■□□□□ 0.14
VPS33A-206ENST00000542310 GATAD2AQ86YP4 633 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 CHST14Q8NCH0 376 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 JOSD2Q8TAC2 188 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 GRIN3AQ8TCU5 1115 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 FAM172AQ8WUF8 416 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 TBC1D31Q96DN5 1066 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 PCMTD1Q96MG8 357 aaPredicted RBP15.95■□□□□ 0.14
VPS33A-206ENST00000542310 SPON2Q9BUD6 331 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 SELENOOQ9BVL4 669 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 WASF2Q9Y6W5 498 aa15.95■□□□□ 0.14
VPS33A-206ENST00000542310 GOLGA4Q13439 2230 aaKnown RBP15.94■□□□□ 0.14
VPS33A-206ENST00000542310 A0A1W2PQU0 124 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 AP1G1O43747 822 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 LEFTY1O75610 366 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 LRIG2O94898 1065 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 CCDC172P0C7W6 258 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 GPD1P21695 349 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 HNRNPA2B1P22626 353 aaKnown RBP15.94■□□□□ 0.14
VPS33A-206ENST00000542310 AKT2P31751 481 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 AIF1P55008 147 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 NCAPHQ15003 741 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 ZNF284Q2VY69 593 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 KIAA1161Q6NSJ0 714 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 PPP1R2P3Q6NXS1 205 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 APTXQ7Z2E3 356 aaKnown RBP15.94■□□□□ 0.14
VPS33A-206ENST00000542310 ARHGEF2Q92974 986 aaKnown RBP15.94■□□□□ 0.14
VPS33A-206ENST00000542310 LRIG1Q96JA1 1093 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 CNDP2Q96KP4 475 aaKnown RBP15.94■□□□□ 0.14
VPS33A-206ENST00000542310 PCDHB18PQ96TA0 734 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 HEPHQ9BQS7 1158 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms